| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09396 | 4:1,954,243-1,955,475 | + | - | CX4g032889 | LOC_Os04g04980 | - | - | Detail |
| C1H4g14951 | 4:1,958,690-1,959,076 | + | - | CX4g035481 | - | - | - | Detail |
| C1H4g07691 | 4:1,959,969-1,962,779 | - | C2H4g13248 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C1H4g00435 | 4:1,983,301-1,984,281 | + | C2H4g08946 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C1H4g17319 | 4:2,015,691-2,021,182 | + | C2H4g24029 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C1H4g25434 | 4:2,025,548-2,026,861 | + | C2H7g00832 | CX7g049825 | LOC_Os08g36610 | Os08g0470000 | - | Detail |
| C1H4g22056 | 4:2,039,862-2,040,605 | - | C2H4g03790 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C1H4g09732 | 4:2,048,855-2,052,166 | + | C2H4g29226 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C1H4g03654 | 4:2,104,746-2,106,344 | + | C2H4g12932 | CX4g032369 | LOC_Os04g05560 | Os04g0141400 | - | Detail |
| C1H4g03587 | 4:2,115,368-2,119,550 | + | C2H4g05331 | CX4g032104 | LOC_Os04g05580 | Os04g0146300 | - | Detail |
| C1H4g20211 | 4:2,148,969-2,151,089 | + | C2H4g20001 | CX4g031557 | LOC_Os04g06900 | Os04g0141800 | - | Detail |
| C1H4g00711 | 4:2,174,652-2,176,874 | + | C2H4g04256 | CX4g034357 | LOC_Os04g06500 | Os04g0147200 | - | Detail |
| C1H4g06528 | 4:2,183,226-2,185,343 | - | C2H4g26531 | CX4g034971 | LOC_Os04g05360 | Os04g0139100 | - | Detail |
| C1H4g27563 | 4:2,218,614-2,220,309 | + | C2H4g27755 | CX4g032274 | LOC_Os04g07110 | Os04g0154800 | - | Detail |
| C1H4g12610 | 4:2,259,803-2,261,041 | - | C2H4g22457 | CX4g034548 | LOC_Os04g06520 | Os04g0149400 | - | Detail |
| C1H4g22103 | 4:2,265,592-2,267,862 | + | C2H4g26531 | CX4g034656 | LOC_Os04g06590 | Os04g0150300 | - | Detail |
| C1H4g02050 | 4:2,289,757-2,290,292 | + | C2H4g16574 | CX4g033175 | LOC_Os04g06734 | Os04g0151700 | - | Detail |
| C1H4g26398 | 4:2,327,497-2,328,799 | + | C2H4g29954 | CX4g033175 | LOC_Os04g06734 | Os04g0151700 | - | Detail |
| C1H4g03885 | 4:2,338,961-2,346,616 | - | C2H4g22772 | CX4g033821 | LOC_Os04g06770 | Os04g0151800 | - | Detail |
| C1H4g04643 | 4:2,357,614-2,360,689 | - | C2H4g29394 | CX4g031659 | LOC_Os04g06790 | Os04g0151900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023346 | 2:24,492,992-24,494,400 | - | C1H2g26313 | C2H2g10710 | LOC_Os02g43660 | Os02g0653200 | - | Detail |
| CX2g021810 | 2:24,497,354-24,500,550 | - | C1H2g26739 | C2H2g17866 | LOC_Os02g43670 | Os02g0653400 | - | Detail |
| CX2g020682 | 2:24,509,664-24,512,030 | + | C1H2g28527 | C2H2g29957 | LOC_Os02g43690 | Os02g0653800 | - | Detail |
| CX2g024848 | 2:24,521,717-24,523,360 | + | C1H2g11740 | C2H2g09240 | LOC_Os02g43700 | Os02g0653900 | - | Detail |
| CX2g019808 | 2:24,523,962-24,530,815 | + | C1H2g31729 | C2H2g03929 | LOC_Os02g43720 | Os02g0654000 | - | Detail |
| CX2g019259 | 2:24,534,776-24,537,395 | + | C1H2g10669 | C2H2g25436 | LOC_Os02g43740 | Os02g0654300 | OsAGC5 | Detail |
| CX2g021214 | 2:24,537,896-24,545,697 | - | C1H2g01240 | C2H2g16227 | LOC_Os02g43750 | Os02g0654400 | - | Detail |
| CX2g019845 | 2:24,547,705-24,551,839 | + | C1H2g30250 | C2H2g29983 | LOC_Os02g43760 | Os02g0654500 | OsUCH3 | Detail |
| CX2g019074 | 2:24,552,404-24,554,490 | - | C1H2g07140 | C2H2g23814 | LOC_Os02g43770 | Os02g0654600 | - | Detail |
| CX2g024153 | 2:24,558,153-24,558,329 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g019463 | 2:24,560,774-24,561,706 | - | C1H2g23870 | C2H2g09844 | LOC_Os02g43790 | Os02g0654700 | ERF91, OsERF#091, OsERF091, OsERF91, AP59, OsAP59, AP2/EREBP#147, AP2/EREBP147, OsBIERF3, BIERF3 | Detail |
| CX2g019925 | 2:24,564,870-24,566,830 | + | C1H2g15432 | C2H2g23602 | LOC_Os02g43810 | Os02g0655100 | - | Detail |
| CX2g022981 | 2:24,575,862-24,576,695 | + | C1H2g01941 | C2H2g05194 | LOC_Os02g43820 | Os02g0655200 | ERF95, OsERF#095, OsSta2 | Detail |
| CX2g023444 | 2:24,587,065-24,587,907 | - | C1H2g19564 | C2H2g06967 | LOC_Os02g43830 | Os02g0655300 | - | Detail |
| CX2g022031 | 2:24,596,063-24,600,102 | - | C1H2g04583 | C2H2g05782 | LOC_Os02g43850 | Os02g0655600 | - | Detail |
| CX2g022437 | 2:24,604,774-24,605,043 | + | C1H1g16487 | C2H2g06716 | LOC_Os10g02680 | Os10g0116300 | - | Detail |
| CX2g021119 | 2:24,609,921-24,613,406 | + | C1H2g12579 | C2H2g15593 | LOC_Os02g43860 | Os02g0655700 | - | Detail |
| CX2g020362 | 2:24,615,664-24,616,110 | - | C1H2g18315 | C2H2g04524 | LOC_Os02g43865 | Os02g0655750 | - | Detail |
| CX2g023774 | 2:24,616,944-24,619,749 | - | C1H2g03124 | C2H2g17063 | LOC_Os02g43870 | Os02g0655800 | - | Detail |
| CX2g021832 | 2:24,623,796-24,624,749 | - | C1H2g19219 | C2H2g21079 | LOC_Os02g43900 | Os02g0656100 | - | Detail |