| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g06798 | 3:2,538,968-2,540,935 | - | C2H3g15451 | CX3g027324 | LOC_Os03g05740 | Os03g0151900 | - | Detail |
| C1H3g31058 | 3:2,548,029-2,549,770 | - | C2H3g30386 | CX3g030512 | LOC_Os03g05750 | Os03g0152000 | - | Detail |
| C1H3g20082 | 3:2,552,092-2,554,996 | + | C2H3g26526 | CX3g026911 | LOC_Os03g05760 | Os03g0152100 | - | Detail |
| C1H3g31474 | 3:2,561,972-2,563,538 | + | C2H3g15744 | CX3g029839 | LOC_Os03g05770 | Os03g0152300 | - | Detail |
| C1H3g20421 | 3:2,566,417-2,571,266 | - | C2H3g01485 | CX3g028932 | LOC_Os03g05780 | Os03g0152400 | - | Detail |
| C1H3g15708 | 3:2,580,682-2,583,231 | - | C2H3g04206 | CX3g025626 | LOC_Os03g05800 | Os03g0152600 | - | Detail |
| C1H3g24101 | 3:2,585,577-2,590,413 | + | C2H3g16126 | CX3g028763 | LOC_Os03g05806 | Os03g0152700 | TCD3, OsPUS1 | Detail |
| C1H3g07789 | 3:2,591,035-2,596,598 | + | C2H3g23725 | CX3g028004 | LOC_Os03g05812 | Os03g0152800 | - | Detail |
| C1H3g06558 | 3:2,597,882-2,606,640 | + | C2H3g05754 | CX3g031112 | LOC_Os03g05820 | Os03g0152900 | - | Detail |
| C1H3g08014 | 3:2,606,803-2,614,651 | - | C2H3g15298 | CX3g030862 | LOC_Os03g05830 | Os03g0153000 | - | Detail |
| C1H3g09831 | 3:2,616,961-2,617,373 | + | C2H3g18916 | - | LOC_Os03g05840 | Os03g0153100 | - | Detail |
| C1H3g11969 | 3:2,618,221-2,620,032 | + | C2H3g20486 | - | LOC_Os03g05880 | Os03g0153100 | - | Detail |
| C1H3g06494 | 3:2,628,053-2,629,267 | + | C2H3g30530 | - | LOC_Os03g05880 | Os03g0153500 | - | Detail |
| C1H3g10654 | 3:2,637,258-2,638,982 | + | C2H3g25228 | - | LOC_Os03g05900 | Os03g0153900 | - | Detail |
| C1H3g09326 | 3:2,640,113-2,641,966 | + | C2H3g12605 | - | LOC_Os03g05910 | Os03g0154000 | - | Detail |
| C1H3g00046 | 3:2,642,666-2,646,216 | + | C2H3g05179 | - | LOC_Os03g05920 | Os03g0154100 | - | Detail |
| C1H3g08889 | 3:2,646,671-2,647,198 | + | C2H3g05062 | CX11g014366 | LOC_Os03g05930 | Os11g0602400 | - | Detail |
| C1H3g17558 | 3:2,650,576-2,653,794 | + | C2H3g25344 | CX3g029639 | LOC_Os03g05980 | Os03g0154700 | - | Detail |
| C1H3g01440 | 3:2,657,467-2,659,068 | + | C2H3g05179 | - | LOC_Os03g05920 | Os03g0154100 | - | Detail |
| C1H3g23253 | 3:2,661,785-2,662,716 | + | C2H3g13676 | CX3g026862 | LOC_Os03g06000 | Os03g0155300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023346 | 2:24,492,992-24,494,400 | - | C1H2g26313 | C2H2g10710 | LOC_Os02g43660 | Os02g0653200 | - | Detail |
| CX2g021810 | 2:24,497,354-24,500,550 | - | C1H2g26739 | C2H2g17866 | LOC_Os02g43670 | Os02g0653400 | - | Detail |
| CX2g020682 | 2:24,509,664-24,512,030 | + | C1H2g28527 | C2H2g29957 | LOC_Os02g43690 | Os02g0653800 | - | Detail |
| CX2g024848 | 2:24,521,717-24,523,360 | + | C1H2g11740 | C2H2g09240 | LOC_Os02g43700 | Os02g0653900 | - | Detail |
| CX2g019808 | 2:24,523,962-24,530,815 | + | C1H2g31729 | C2H2g03929 | LOC_Os02g43720 | Os02g0654000 | - | Detail |
| CX2g019259 | 2:24,534,776-24,537,395 | + | C1H2g10669 | C2H2g25436 | LOC_Os02g43740 | Os02g0654300 | OsAGC5 | Detail |
| CX2g021214 | 2:24,537,896-24,545,697 | - | C1H2g01240 | C2H2g16227 | LOC_Os02g43750 | Os02g0654400 | - | Detail |
| CX2g019845 | 2:24,547,705-24,551,839 | + | C1H2g30250 | C2H2g29983 | LOC_Os02g43760 | Os02g0654500 | OsUCH3 | Detail |
| CX2g019074 | 2:24,552,404-24,554,490 | - | C1H2g07140 | C2H2g23814 | LOC_Os02g43770 | Os02g0654600 | - | Detail |
| CX2g024153 | 2:24,558,153-24,558,329 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g019463 | 2:24,560,774-24,561,706 | - | C1H2g23870 | C2H2g09844 | LOC_Os02g43790 | Os02g0654700 | ERF91, OsERF#091, OsERF091, OsERF91, AP59, OsAP59, AP2/EREBP#147, AP2/EREBP147, OsBIERF3, BIERF3 | Detail |
| CX2g019925 | 2:24,564,870-24,566,830 | + | C1H2g15432 | C2H2g23602 | LOC_Os02g43810 | Os02g0655100 | - | Detail |
| CX2g022981 | 2:24,575,862-24,576,695 | + | C1H2g01941 | C2H2g05194 | LOC_Os02g43820 | Os02g0655200 | ERF95, OsERF#095, OsSta2 | Detail |
| CX2g023444 | 2:24,587,065-24,587,907 | - | C1H2g19564 | C2H2g06967 | LOC_Os02g43830 | Os02g0655300 | - | Detail |
| CX2g022031 | 2:24,596,063-24,600,102 | - | C1H2g04583 | C2H2g05782 | LOC_Os02g43850 | Os02g0655600 | - | Detail |
| CX2g022437 | 2:24,604,774-24,605,043 | + | C1H1g16487 | C2H2g06716 | LOC_Os10g02680 | Os10g0116300 | - | Detail |
| CX2g021119 | 2:24,609,921-24,613,406 | + | C1H2g12579 | C2H2g15593 | LOC_Os02g43860 | Os02g0655700 | - | Detail |
| CX2g020362 | 2:24,615,664-24,616,110 | - | C1H2g18315 | C2H2g04524 | LOC_Os02g43865 | Os02g0655750 | - | Detail |
| CX2g023774 | 2:24,616,944-24,619,749 | - | C1H2g03124 | C2H2g17063 | LOC_Os02g43870 | Os02g0655800 | - | Detail |
| CX2g021832 | 2:24,623,796-24,624,749 | - | C1H2g19219 | C2H2g21079 | LOC_Os02g43900 | Os02g0656100 | - | Detail |