| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09033 | 1:411,905-423,479 | + | C1H1g12709 | CX1g004858 | LOC_Os01g01830 | Os01g0108200 | - | Detail |
| C2H1g30343 | 1:429,845-431,930 | + | C1H1g08683 | CX1g006268 | LOC_Os01g01840 | Os01g0108400 | - | Detail |
| C2H1g23960 | 1:440,181-442,624 | + | C1H1g11414 | CX1g002791 | LOC_Os01g01870 | Os01g0108600 | - | Detail |
| C2H1g19907 | 1:446,175-447,165 | + | C1H1g06105 | CX1g005800 | - | Os01g0108800 | - | Detail |
| C2H1g02003 | 1:447,227-448,126 | + | C1H1g06105 | CX1g005800 | LOC_Os01g01890 | - | - | Detail |
| C2H1g26140 | 1:452,593-459,871 | + | C1H1g07324 | CX1g006717 | LOC_Os01g01920 | Os01g0109300 | WFSL1, ST3, OsSAMHD1 | Detail |
| C2H1g08730 | 1:460,469-461,194 | + | - | CX1g003141 | LOC_Os01g01930 | - | - | Detail |
| C2H1g04643 | 1:462,073-462,789 | + | C1H1g25672 | CX1g002043 | LOC_Os01g01940 | Os01g0109500 | - | Detail |
| C2H1g05030 | 1:465,063-474,582 | - | C1H1g19369 | CX1g002189 | LOC_Os01g01960 | Os01g0109700 | - | Detail |
| C2H1g22311 | 1:477,910-479,562 | - | C1H1g20420 | CX1g007051 | LOC_Os01g01970 | Os01g0109750 | - | Detail |
| C2H1g21187 | 1:495,078-500,683 | + | C1H1g31250 | CX1g002134 | LOC_Os01g02000 | Os01g0110100 | PHO1;1, OsPHO1;1 | Detail |
| C2H1g20426 | 1:500,725-501,833 | - | C1H1g24670 | CX1g005182 | - | Os01g0110200 | - | Detail |
| C2H1g06307 | 1:504,199-507,588 | + | C1H1g18826 | CX1g002536 | LOC_Os01g02020 | Os01g0110400 | - | Detail |
| C2H1g08045 | 1:508,740-512,790 | - | C1H1g08982 | CX1g006024 | LOC_Os01g02040 | Os01g0110500 | - | Detail |
| C2H1g03397 | 1:511,189-512,022 | + | - | CX1g001649 | - | Os01g0110600 | - | Detail |
| C2H1g24290 | 1:516,876-517,687 | + | C1H1g06776 | - | - | Os01g0763900 | - | Detail |
| C2H1g03511 | 1:518,111-528,014 | - | C1H1g18501 | CX1g005092 | LOC_Os01g02050 | Os01g0110700 | - | Detail |
| C2H1g15524 | 1:532,388-535,436 | - | C1H1g27492 | CX1g001240 | LOC_Os01g02060 | Os01g0110800 | - | Detail |
| C2H1g11966 | 1:540,514-541,083 | + | C1H1g19659 | CX1g006065 | LOC_Os01g02070 | Os01g0111000 | OsPMEI1 | Detail |
| C2H1g07695 | 1:541,316-542,306 | - | C1H1g17243 | CX1g003369 | LOC_Os01g02080 | Os01g0111100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004633 | 1:11,171,140-11,176,534 | + | C1H1g03998 | C2H1g27428 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| CX1g006655 | 1:11,180,708-11,184,117 | + | C1H1g12639 | C2H1g01944 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| CX1g007268 | 1:11,197,796-11,200,992 | + | C1H1g19397 | C2H1g06794 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| CX1g006180 | 1:11,201,393-11,202,587 | - | C1H1g03743 | C2H1g22823 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| CX1g006614 | 1:11,213,440-11,215,065 | + | - | C2H1g09944 | LOC_Os01g22710 | - | - | Detail |
| CX1g003069 | 1:11,217,988-11,218,671 | + | - | - | LOC_Os01g22720 | Os01g0330650 | - | Detail |
| CX1g004068 | 1:11,239,004-11,244,161 | + | C1H1g09878 | C2H1g06111 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| CX1g001443 | 1:11,254,569-11,257,952 | + | C1H1g18229 | C2H1g00150 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| CX1g005311 | 1:11,270,011-11,273,417 | + | C1H1g29292 | C2H1g27905 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| CX1g005606 | 1:11,275,201-11,284,111 | - | C1H1g15812 | C2H1g02015 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| CX1g006261 | 1:11,294,402-11,297,246 | + | C1H1g25028 | C2H1g25435 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| CX1g000233 | 1:11,302,191-11,302,340 | - | - | - | - | Os01g0332700 | - | Detail |
| CX1g005436 | 1:11,308,487-11,311,969 | - | C1H1g09638 | C2H1g19970 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| CX1g002203 | 1:11,314,794-11,317,675 | - | C1H1g01670 | C2H1g05656 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| CX1g000730 | 1:11,326,894-11,330,580 | - | - | - | LOC_Os10g26770 | - | - | Detail |
| CX1g002087 | 1:11,336,788-11,337,164 | - | - | - | - | - | - | Detail |
| CX1g004352 | 1:11,363,105-11,365,303 | + | C1H1g10843 | C2H1g26385 | LOC_Os01g23370 | Os01g0333600 | - | Detail |
| CX1g003425 | 1:11,368,480-11,368,751 | - | - | - | - | - | - | Detail |
| CX1g006442 | 1:11,383,576-11,385,918 | + | C1H1g07869 | C2H1g15414 | LOC_Os01g23440 | Os01g0335600 | - | Detail |
| CX1g000930 | 1:11,388,816-11,391,425 | + | C1H1g08644 | C2H1g23874 | LOC_Os01g23380 | Os01g0335700 | - | Detail |