| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g06930 | 7:7,860,876-7,864,301 | + | C1H7g26865 | CX7g046541 | LOC_Os07g16140 | Os07g0264900 | - | Detail |
| C2H7g30119 | 7:7,866,862-7,867,980 | + | C1H7g23436 | - | LOC_Os07g16150 | Os07g0265100 | - | Detail |
| C2H7g00104 | 7:7,912,090-7,926,446 | - | - | - | - | - | - | Detail |
| C2H7g12974 | 7:7,950,904-7,954,068 | - | C1H7g10426 | - | - | - | - | Detail |
| C2H7g16411 | 7:8,047,136-8,048,842 | + | C1H7g31044 | CX7g047943 | LOC_Os07g16740 | Os07g0270800 | - | Detail |
| C2H7g02933 | 7:8,061,213-8,061,494 | + | - | CX7g047924 | LOC_Os07g16330 | - | - | Detail |
| C2H7g19483 | 7:8,073,639-8,078,529 | - | C1H7g24627 | CX7g049435 | LOC_Os07g17140 | Os07g0267400 | - | Detail |
| C2H7g28014 | 7:8,079,355-8,079,774 | + | - | CX7g047022 | LOC_Os07g16380 | - | - | Detail |
| C2H7g14809 | 7:8,102,007-8,105,108 | + | C1H7g25362 | CX7g046217 | LOC_Os07g16800 | Os07g0269800 | - | Detail |
| C2H7g15279 | 7:8,159,732-8,165,004 | + | C1H7g02687 | CX7g048933 | LOC_Os07g16950 | Os07g0270900 | - | Detail |
| C2H7g29351 | 7:8,163,946-8,166,685 | - | C1H7g17873 | CX7g046605 | LOC_Os07g16960 | Os07g0270950 | - | Detail |
| C2H7g00593 | 7:8,166,748-8,167,631 | - | C1H7g01659 | - | - | - | - | Detail |
| C2H7g14015 | 7:8,173,431-8,178,761 | - | C1H7g24791 | CX7g047848 | LOC_Os07g16970 | Os07g0271000 | - | Detail |
| C2H7g16068 | 7:8,201,844-8,203,386 | + | C1H7g05870 | CX7g046687 | LOC_Os07g17010 | Os07g0271500 | - | Detail |
| C2H7g27278 | 7:8,206,876-8,210,116 | - | - | CX7g049996 | - | - | - | Detail |
| C2H7g04284 | 7:8,211,629-8,212,681 | - | C1H7g30133 | CX7g050351 | LOC_Os07g17040 | Os07g0271600 | - | Detail |
| C2H7g26672 | 7:8,213,150-8,214,301 | - | C1H7g02687 | CX7g048933 | LOC_Os07g16950 | Os07g0270900 | - | Detail |
| C2H7g29334 | 7:8,217,836-8,218,243 | - | C1H7g05031 | CX7g049619 | - | - | - | Detail |
| C2H7g27625 | 7:8,229,866-8,231,230 | - | C1H7g30743 | CX7g047444 | LOC_Os07g17050 | Os07g0447000 | - | Detail |
| C2H7g18475 | 7:8,231,367-8,232,034 | - | C1H7g30743 | CX7g047444 | LOC_Os07g17050 | Os07g0271700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004633 | 1:11,171,140-11,176,534 | + | C1H1g03998 | C2H1g27428 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| CX1g006655 | 1:11,180,708-11,184,117 | + | C1H1g12639 | C2H1g01944 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| CX1g007268 | 1:11,197,796-11,200,992 | + | C1H1g19397 | C2H1g06794 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| CX1g006180 | 1:11,201,393-11,202,587 | - | C1H1g03743 | C2H1g22823 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| CX1g006614 | 1:11,213,440-11,215,065 | + | - | C2H1g09944 | LOC_Os01g22710 | - | - | Detail |
| CX1g003069 | 1:11,217,988-11,218,671 | + | - | - | LOC_Os01g22720 | Os01g0330650 | - | Detail |
| CX1g004068 | 1:11,239,004-11,244,161 | + | C1H1g09878 | C2H1g06111 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| CX1g001443 | 1:11,254,569-11,257,952 | + | C1H1g18229 | C2H1g00150 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| CX1g005311 | 1:11,270,011-11,273,417 | + | C1H1g29292 | C2H1g27905 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| CX1g005606 | 1:11,275,201-11,284,111 | - | C1H1g15812 | C2H1g02015 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| CX1g006261 | 1:11,294,402-11,297,246 | + | C1H1g25028 | C2H1g25435 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| CX1g000233 | 1:11,302,191-11,302,340 | - | - | - | - | Os01g0332700 | - | Detail |
| CX1g005436 | 1:11,308,487-11,311,969 | - | C1H1g09638 | C2H1g19970 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| CX1g002203 | 1:11,314,794-11,317,675 | - | C1H1g01670 | C2H1g05656 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| CX1g000730 | 1:11,326,894-11,330,580 | - | - | - | LOC_Os10g26770 | - | - | Detail |
| CX1g002087 | 1:11,336,788-11,337,164 | - | - | - | - | - | - | Detail |
| CX1g004352 | 1:11,363,105-11,365,303 | + | C1H1g10843 | C2H1g26385 | LOC_Os01g23370 | Os01g0333600 | - | Detail |
| CX1g003425 | 1:11,368,480-11,368,751 | - | - | - | - | - | - | Detail |
| CX1g006442 | 1:11,383,576-11,385,918 | + | C1H1g07869 | C2H1g15414 | LOC_Os01g23440 | Os01g0335600 | - | Detail |
| CX1g000930 | 1:11,388,816-11,391,425 | + | C1H1g08644 | C2H1g23874 | LOC_Os01g23380 | Os01g0335700 | - | Detail |