| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03391 | 6:22,018,466-22,020,171 | + | - | CX10g010054 | LOC_Os10g21236 | - | - | Detail |
| C2H6g29467 | 6:22,020,966-22,021,531 | + | - | - | LOC_Os10g21230 | - | - | Detail |
| C2H6g26608 | 6:22,023,138-22,024,661 | + | C1H6g24215 | CX6g042100 | LOC_Os10g21240 | Os06g0568200 | - | Detail |
| C2H6g11551 | 6:22,027,926-22,029,599 | - | - | CX6g044619 | LOC_Os10g21250 | - | - | Detail |
| C2H6g06159 | 6:22,030,779-22,031,889 | - | - | CX6g043647 | LOC_Os10g21254 | - | - | Detail |
| C2H6g25362 | 6:22,037,482-22,037,907 | - | - | CX6g045339 | LOC_Os01g58022 | Os12g0423484 | - | Detail |
| C2H6g02598 | 6:22,053,748-22,054,128 | - | C1H6g11277 | CX2g023961 | LOC_Os06g41870 | Os06g0624000 | - | Detail |
| C2H6g02719 | 6:22,060,871-22,066,113 | + | C1H6g01359 | CX6g042465 | LOC_Os06g41880 | Os06g0624100 | - | Detail |
| C2H6g00747 | 6:22,061,584-22,067,112 | - | C1H6g00796 | - | - | - | - | Detail |
| C2H6g16937 | 6:22,072,841-22,075,445 | + | C1H6g18313 | CX6g041453 | LOC_Os06g41910 | Os06g0624700 | - | Detail |
| C2H6g18819 | 6:22,090,234-22,094,540 | + | C1H6g11989 | CX6g045135 | LOC_Os06g41930 | Os06g0624900 | - | Detail |
| C2H6g11568 | 6:22,109,151-22,110,388 | + | - | - | - | - | - | Detail |
| C2H6g28797 | 6:22,113,460-22,115,442 | + | C1H6g11677 | CX6g045536 | LOC_Os06g41980 | Os06g0625200 | - | Detail |
| C2H6g01537 | 6:22,115,534-22,125,784 | - | C1H6g13871 | CX6g045878 | LOC_Os06g41990 | Os06g0625400 | SPP | Detail |
| C2H6g02688 | 6:22,139,230-22,139,878 | + | C1H6g05053 | CX6g043302 | LOC_Os06g42020 | Os06g0625700 | OsCSLA9 | Detail |
| C2H6g09068 | 6:22,140,686-22,144,628 | + | C1H6g05053 | CX6g043302 | LOC_Os06g42020 | Os06g0625700 | OsCSLA9 | Detail |
| C2H6g22642 | 6:22,144,214-22,150,577 | - | C1H6g31374 | CX6g042213 | LOC_Os06g42030 | Os06g0625800 | - | Detail |
| C2H6g11680 | 6:22,172,783-22,174,774 | + | C1H6g23109 | CX6g045268 | - | - | - | Detail |
| C2H6g15686 | 6:22,220,512-22,222,055 | + | C1H6g09355 | CX6g045016 | LOC_Os06g42280 | Os06g0628032 | - | Detail |
| C2H6g14286 | 6:22,231,427-22,238,847 | - | C1H6g08901 | CX6g043658 | LOC_Os06g42310 | Os06g0628500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004633 | 1:11,171,140-11,176,534 | + | C1H1g03998 | C2H1g27428 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| CX1g006655 | 1:11,180,708-11,184,117 | + | C1H1g12639 | C2H1g01944 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| CX1g007268 | 1:11,197,796-11,200,992 | + | C1H1g19397 | C2H1g06794 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| CX1g006180 | 1:11,201,393-11,202,587 | - | C1H1g03743 | C2H1g22823 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| CX1g006614 | 1:11,213,440-11,215,065 | + | - | C2H1g09944 | LOC_Os01g22710 | - | - | Detail |
| CX1g003069 | 1:11,217,988-11,218,671 | + | - | - | LOC_Os01g22720 | Os01g0330650 | - | Detail |
| CX1g004068 | 1:11,239,004-11,244,161 | + | C1H1g09878 | C2H1g06111 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| CX1g001443 | 1:11,254,569-11,257,952 | + | C1H1g18229 | C2H1g00150 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| CX1g005311 | 1:11,270,011-11,273,417 | + | C1H1g29292 | C2H1g27905 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| CX1g005606 | 1:11,275,201-11,284,111 | - | C1H1g15812 | C2H1g02015 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| CX1g006261 | 1:11,294,402-11,297,246 | + | C1H1g25028 | C2H1g25435 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| CX1g000233 | 1:11,302,191-11,302,340 | - | - | - | - | Os01g0332700 | - | Detail |
| CX1g005436 | 1:11,308,487-11,311,969 | - | C1H1g09638 | C2H1g19970 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| CX1g002203 | 1:11,314,794-11,317,675 | - | C1H1g01670 | C2H1g05656 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| CX1g000730 | 1:11,326,894-11,330,580 | - | - | - | LOC_Os10g26770 | - | - | Detail |
| CX1g002087 | 1:11,336,788-11,337,164 | - | - | - | - | - | - | Detail |
| CX1g004352 | 1:11,363,105-11,365,303 | + | C1H1g10843 | C2H1g26385 | LOC_Os01g23370 | Os01g0333600 | - | Detail |
| CX1g003425 | 1:11,368,480-11,368,751 | - | - | - | - | - | - | Detail |
| CX1g006442 | 1:11,383,576-11,385,918 | + | C1H1g07869 | C2H1g15414 | LOC_Os01g23440 | Os01g0335600 | - | Detail |
| CX1g000930 | 1:11,388,816-11,391,425 | + | C1H1g08644 | C2H1g23874 | LOC_Os01g23380 | Os01g0335700 | - | Detail |