| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13789 | 3:22,016,452-22,018,966 | - | C2H3g05535 | CX3g030510 | LOC_Os03g41460 | Os03g0610900 | SAPK10, OsSAPK10 | Detail |
| C1H3g22269 | 3:22,029,244-22,033,852 | + | C2H3g15741 | CX3g026107 | LOC_Os03g41510 | Os03g0611200 | - | Detail |
| C1H3g17986 | 3:22,035,539-22,038,425 | - | C2H3g25650 | CX3g025338 | LOC_Os03g41530 | Os03g0611700 | - | Detail |
| C1H3g17011 | 3:22,070,131-22,071,051 | + | C2H3g04855 | CX3g025821 | LOC_Os03g41600 | Os03g0612400 | - | Detail |
| C1H3g12958 | 3:22,078,042-22,082,492 | - | C2H3g09198 | CX3g031277 | LOC_Os03g41612 | Os03g0612600 | - | Detail |
| C1H3g29822 | 3:22,105,761-22,111,850 | + | C2H3g10005 | CX3g030220 | LOC_Os03g42010 | Os03g0616300 | - | Detail |
| C1H3g02131 | 3:22,112,841-22,118,431 | + | C2H3g25190 | CX3g027194 | LOC_Os03g42020 | Os03g0616400 | - | Detail |
| C1H3g04775 | 3:22,122,945-22,128,579 | - | C2H3g04640 | CX3g028407 | LOC_Os03g42040 | Os03g0616500 | - | Detail |
| C1H3g10684 | 3:22,134,390-22,149,984 | - | C2H3g04177 | CX3g025679 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| C1H3g02090 | 3:22,185,359-22,186,825 | - | C2H3g24758 | CX3g029365 | LOC_Os03g42070 | Os03g0617500 | - | Detail |
| C1H3g25739 | 3:22,218,359-22,222,460 | - | C2H3g20240 | CX3g028127 | LOC_Os03g42110 | Os03g0617900 | - | Detail |
| C1H3g17864 | 3:22,244,975-22,246,986 | - | C2H3g19029 | CX3g025773 | LOC_Os03g42130 | Os03g0618300 | - | Detail |
| C1H3g22177 | 3:22,250,794-22,254,930 | + | - | - | - | - | - | Detail |
| C1H3g03687 | 3:22,273,330-22,278,555 | + | C2H3g03302 | CX3g029634 | LOC_Os03g42220 | Os03g0619400 | - | Detail |
| C1H3g26153 | 3:22,280,379-22,283,088 | + | C2H3g27772 | CX3g026756 | LOC_Os03g42230 | Os03g0619600 | - | Detail |
| C1H3g06725 | 3:22,285,276-22,292,010 | + | C2H3g24221 | CX3g025711 | LOC_Os03g42240 | Os03g0619800 | - | Detail |
| C1H3g18743 | 3:22,296,247-22,298,712 | + | C2H3g00057 | CX3g025711 | LOC_Os03g42230 | Os03g0619850 | - | Detail |
| C1H3g14727 | 3:22,307,196-22,309,040 | + | C2H3g18118 | CX3g026756 | LOC_Os03g42280 | Os03g0620400 | - | Detail |
| C1H3g10562 | 3:22,316,290-22,317,279 | + | C2H3g09124 | CX3g026756 | LOC_Os03g42240 | Os03g0620500 | - | Detail |
| C1H3g27023 | 3:22,318,784-22,319,764 | + | C2H3g05492 | CX3g025711 | LOC_Os03g42290 | Os03g0620400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004633 | 1:11,171,140-11,176,534 | + | C1H1g03998 | C2H1g27428 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| CX1g006655 | 1:11,180,708-11,184,117 | + | C1H1g12639 | C2H1g01944 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| CX1g007268 | 1:11,197,796-11,200,992 | + | C1H1g19397 | C2H1g06794 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| CX1g006180 | 1:11,201,393-11,202,587 | - | C1H1g03743 | C2H1g22823 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| CX1g006614 | 1:11,213,440-11,215,065 | + | - | C2H1g09944 | LOC_Os01g22710 | - | - | Detail |
| CX1g003069 | 1:11,217,988-11,218,671 | + | - | - | LOC_Os01g22720 | Os01g0330650 | - | Detail |
| CX1g004068 | 1:11,239,004-11,244,161 | + | C1H1g09878 | C2H1g06111 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| CX1g001443 | 1:11,254,569-11,257,952 | + | C1H1g18229 | C2H1g00150 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| CX1g005311 | 1:11,270,011-11,273,417 | + | C1H1g29292 | C2H1g27905 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| CX1g005606 | 1:11,275,201-11,284,111 | - | C1H1g15812 | C2H1g02015 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| CX1g006261 | 1:11,294,402-11,297,246 | + | C1H1g25028 | C2H1g25435 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| CX1g000233 | 1:11,302,191-11,302,340 | - | - | - | - | Os01g0332700 | - | Detail |
| CX1g005436 | 1:11,308,487-11,311,969 | - | C1H1g09638 | C2H1g19970 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| CX1g002203 | 1:11,314,794-11,317,675 | - | C1H1g01670 | C2H1g05656 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| CX1g000730 | 1:11,326,894-11,330,580 | - | - | - | LOC_Os10g26770 | - | - | Detail |
| CX1g002087 | 1:11,336,788-11,337,164 | - | - | - | - | - | - | Detail |
| CX1g004352 | 1:11,363,105-11,365,303 | + | C1H1g10843 | C2H1g26385 | LOC_Os01g23370 | Os01g0333600 | - | Detail |
| CX1g003425 | 1:11,368,480-11,368,751 | - | - | - | - | - | - | Detail |
| CX1g006442 | 1:11,383,576-11,385,918 | + | C1H1g07869 | C2H1g15414 | LOC_Os01g23440 | Os01g0335600 | - | Detail |
| CX1g000930 | 1:11,388,816-11,391,425 | + | C1H1g08644 | C2H1g23874 | LOC_Os01g23380 | Os01g0335700 | - | Detail |