| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g12455 | 2:27,759,013-27,761,019 | - | C2H2g17575 | CX2g022260 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| C1H2g29396 | 2:27,762,537-27,767,929 | + | C2H2g05996 | CX2g024123 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| C1H2g07912 | 2:27,770,339-27,772,392 | - | C2H2g05669 | CX2g019961 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| C1H2g04361 | 2:27,773,129-27,773,822 | - | C2H2g05669 | CX2g019961 | LOC_Os02g49540 | - | - | Detail |
| C1H2g01405 | 2:27,788,678-27,796,648 | - | C2H2g28910 | CX2g021134 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| C1H2g31094 | 2:27,798,551-27,801,281 | + | C2H2g03568 | CX2g022512 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C1H2g01710 | 2:27,805,194-27,808,949 | - | C2H2g04353 | CX2g020763 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| C1H2g15124 | 2:27,813,048-27,814,827 | - | C2H2g01821 | CX2g020190 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| C1H2g22353 | 2:27,815,565-27,818,810 | + | C2H2g11437 | CX2g023333 | LOC_Os02g49620 | Os02g0728700 | - | Detail |
| C1H2g07458 | 2:27,819,531-27,821,044 | + | C2H2g09268 | CX2g023611 | LOC_Os02g49630 | Os02g0728800 | OsTET3 | Detail |
| C1H2g30542 | 2:27,826,303-27,827,821 | + | C2H2g09268 | CX2g021846 | LOC_Os02g49640 | Os02g0189100 | - | Detail |
| C1H2g11463 | 2:27,829,129-27,832,758 | + | C2H2g19272 | CX2g018993 | LOC_Os02g49650 | Os02g0729100 | - | Detail |
| C1H2g21451 | 2:27,834,996-27,836,338 | - | C2H2g16186 | CX2g019218 | LOC_Os02g49660 | Os02g0729200 | OsXyBAT3 | Detail |
| C1H2g08307 | 2:27,837,638-27,839,321 | - | C2H2g16186 | CX2g021273 | - | Os02g0729350 | - | Detail |
| C1H2g10424 | 2:27,840,698-27,842,615 | - | C2H2g22569 | CX2g021202 | LOC_Os02g49680 | Os02g0729400 | - | Detail |
| C1H2g03384 | 2:27,857,021-27,859,261 | + | C2H2g11855 | CX2g022732 | LOC_Os02g49700 | Os02g0729700 | - | Detail |
| C1H2g20265 | 2:27,867,893-27,870,542 | + | C2H2g28980 | CX2g022857 | LOC_Os02g49710 | Os02g0178600 | - | Detail |
| C1H2g00762 | 2:27,870,587-27,874,128 | - | C2H2g24627 | CX2g024291 | LOC_Os02g49720 | Os02g0730000 | ALDH2a | Detail |
| C1H2g11181 | 2:27,875,820-27,878,679 | - | C2H2g28834 | CX2g024916 | LOC_Os02g49730 | Os02g0730100 | - | Detail |
| C1H2g01906 | 2:27,892,031-27,896,722 | + | C2H2g02137 | CX2g021108 | LOC_Os02g49760 | Os02g0730300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004633 | 1:11,171,140-11,176,534 | + | C1H1g03998 | C2H1g27428 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| CX1g006655 | 1:11,180,708-11,184,117 | + | C1H1g12639 | C2H1g01944 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| CX1g007268 | 1:11,197,796-11,200,992 | + | C1H1g19397 | C2H1g06794 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| CX1g006180 | 1:11,201,393-11,202,587 | - | C1H1g03743 | C2H1g22823 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| CX1g006614 | 1:11,213,440-11,215,065 | + | - | C2H1g09944 | LOC_Os01g22710 | - | - | Detail |
| CX1g003069 | 1:11,217,988-11,218,671 | + | - | - | LOC_Os01g22720 | Os01g0330650 | - | Detail |
| CX1g004068 | 1:11,239,004-11,244,161 | + | C1H1g09878 | C2H1g06111 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| CX1g001443 | 1:11,254,569-11,257,952 | + | C1H1g18229 | C2H1g00150 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| CX1g005311 | 1:11,270,011-11,273,417 | + | C1H1g29292 | C2H1g27905 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| CX1g005606 | 1:11,275,201-11,284,111 | - | C1H1g15812 | C2H1g02015 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| CX1g006261 | 1:11,294,402-11,297,246 | + | C1H1g25028 | C2H1g25435 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| CX1g000233 | 1:11,302,191-11,302,340 | - | - | - | - | Os01g0332700 | - | Detail |
| CX1g005436 | 1:11,308,487-11,311,969 | - | C1H1g09638 | C2H1g19970 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| CX1g002203 | 1:11,314,794-11,317,675 | - | C1H1g01670 | C2H1g05656 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| CX1g000730 | 1:11,326,894-11,330,580 | - | - | - | LOC_Os10g26770 | - | - | Detail |
| CX1g002087 | 1:11,336,788-11,337,164 | - | - | - | - | - | - | Detail |
| CX1g004352 | 1:11,363,105-11,365,303 | + | C1H1g10843 | C2H1g26385 | LOC_Os01g23370 | Os01g0333600 | - | Detail |
| CX1g003425 | 1:11,368,480-11,368,751 | - | - | - | - | - | - | Detail |
| CX1g006442 | 1:11,383,576-11,385,918 | + | C1H1g07869 | C2H1g15414 | LOC_Os01g23440 | Os01g0335600 | - | Detail |
| CX1g000930 | 1:11,388,816-11,391,425 | + | C1H1g08644 | C2H1g23874 | LOC_Os01g23380 | Os01g0335700 | - | Detail |