| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g30386 | 3:2,493,645-2,495,339 | - | C1H3g31058 | CX3g030512 | LOC_Os03g05750 | Os03g0152000 | - | Detail |
| C2H3g26526 | 3:2,497,685-2,500,591 | + | C1H3g20082 | CX3g026911 | LOC_Os03g05760 | Os03g0152100 | - | Detail |
| C2H3g15744 | 3:2,506,063-2,507,620 | + | C1H3g31474 | CX3g029839 | LOC_Os03g05770 | Os03g0152300 | - | Detail |
| C2H3g01485 | 3:2,509,760-2,514,659 | - | C1H3g20421 | CX3g028932 | LOC_Os03g05780 | Os03g0152400 | - | Detail |
| C2H3g04206 | 3:2,518,282-2,520,831 | - | C1H3g15708 | CX3g025626 | LOC_Os03g05800 | Os03g0152600 | - | Detail |
| C2H3g16126 | 3:2,522,606-2,527,612 | + | C1H3g24101 | CX3g028763 | LOC_Os03g05806 | Os03g0152700 | TCD3, OsPUS1 | Detail |
| C2H3g23725 | 3:2,528,213-2,533,756 | + | C1H3g07789 | CX3g028004 | LOC_Os03g05812 | - | - | Detail |
| C2H3g05754 | 3:2,536,095-2,544,348 | + | C1H3g06558 | CX3g031112 | LOC_Os03g05820 | Os03g0152900 | - | Detail |
| C2H3g15298 | 3:2,545,196-2,552,983 | - | C1H3g08014 | CX3g030862 | LOC_Os03g05830 | Os03g0153000 | - | Detail |
| C2H3g18916 | 3:2,555,365-2,555,777 | + | C1H3g09831 | - | LOC_Os03g05840 | Os03g0153100 | - | Detail |
| C2H3g20486 | 3:2,556,628-2,558,440 | + | C1H3g11969 | - | LOC_Os03g05880 | Os03g0153100 | - | Detail |
| C2H3g30530 | 3:2,566,329-2,567,536 | + | C1H3g06494 | - | LOC_Os03g05880 | Os03g0153500 | - | Detail |
| C2H3g25228 | 3:2,572,439-2,572,768 | + | C1H3g10654 | - | LOC_Os03g05900 | Os03g0153900 | - | Detail |
| C2H3g13712 | 3:2,573,925-2,574,786 | + | C1H3g10654 | - | LOC_Os03g05900 | Os03g0153900 | - | Detail |
| C2H3g12605 | 3:2,576,170-2,578,023 | + | C1H3g09326 | - | LOC_Os03g05910 | Os03g0154000 | - | Detail |
| C2H3g05179 | 3:2,578,722-2,582,272 | + | C1H3g00046 | - | LOC_Os03g05920 | Os03g0154100 | - | Detail |
| C2H3g05062 | 3:2,582,727-2,583,254 | + | C1H3g08889 | CX11g014366 | LOC_Os03g05930 | Os11g0602400 | - | Detail |
| C2H3g25344 | 3:2,586,628-2,589,846 | + | C1H3g17558 | CX3g029639 | LOC_Os03g05980 | Os03g0154700 | - | Detail |
| C2H3g25471 | 3:2,593,167-2,594,976 | + | C1H3g01440 | - | LOC_Os03g05920 | Os03g0154100 | - | Detail |
| C2H3g13676 | 3:2,604,589-2,605,520 | + | C1H3g23253 | CX3g026862 | LOC_Os03g06000 | Os03g0155300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024271 | 2:24,246,430-24,248,912 | + | C1H2g22786 | C2H2g11300 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| CX2g020293 | 2:24,250,145-24,255,394 | - | C1H2g07582 | C2H2g09061 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| CX2g019582 | 2:24,261,256-24,263,660 | - | C1H2g22254 | C2H2g25954 | LOC_Os02g43250 | Os02g0647300 | - | Detail |
| CX2g023905 | 2:24,271,984-24,272,601 | - | - | - | - | - | - | Detail |
| CX2g024426 | 2:24,276,338-24,281,322 | + | C1H2g05654 | C2H2g12985 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| CX2g021973 | 2:24,286,480-24,287,680 | - | C1H2g13691 | C2H2g29445 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| CX2g020713 | 2:24,295,134-24,298,196 | - | C1H2g15207 | C2H2g03827 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| CX2g023171 | 2:24,305,475-24,305,879 | + | - | - | - | - | - | Detail |
| CX2g023500 | 2:24,317,441-24,317,614 | + | - | - | - | - | - | Detail |
| CX2g024370 | 2:24,318,659-24,319,111 | + | - | - | LOC_Os02g43314 | Os02g0648900 | - | Detail |
| CX2g023474 | 2:24,325,101-24,325,355 | + | - | - | - | - | - | Detail |
| CX2g020717 | 2:24,326,246-24,326,525 | - | C1H5g09160 | C2H5g11007 | LOC_Os02g43320 | - | - | Detail |
| CX2g019169 | 2:24,334,967-24,335,737 | + | C1H2g25916 | C2H2g11895 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| CX2g021953 | 2:24,340,077-24,344,405 | - | C1H2g29202 | C2H2g11536 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| CX2g020014 | 2:24,347,175-24,347,369 | + | - | C2H2g22971 | - | - | - | Detail |
| CX2g021451 | 2:24,349,366-24,355,113 | + | C1H2g22654 | C2H2g04607 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| CX2g024526 | 2:24,356,303-24,356,985 | - | C1H2g29127 | C2H2g04813 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| CX2g022915 | 2:24,362,447-24,366,584 | - | C1H2g17207 | C2H2g23002 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| CX2g019779 | 2:24,373,554-24,377,681 | - | C1H2g09379 | C2H2g12264 | LOC_Os02g43410 | Os02g0650300 | - | Detail |
| CX2g022293 | 2:24,380,390-24,380,662 | + | - | C2H2g21909 | LOC_Os02g43420 | - | - | Detail |