| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g25595 | 9:11,946,687-11,956,579 | - | C1H9g03905 | CX9g057906 | LOC_Os09g23760 | Os09g0402533 | - | Detail |
| C2H9g08460 | 9:11,961,058-11,965,290 | - | C1H9g17416 | CX9g056256 | LOC_Os09g23780 | Os09g0403000 | - | Detail |
| C2H9g10325 | 9:11,991,185-11,993,413 | - | C1H9g09430 | CX9g054957 | LOC_Os09g23820 | Os09g0403300 | CYP735A4 | Detail |
| C2H9g24241 | 9:12,070,492-12,074,440 | + | C1H9g24650 | CX9g055965 | LOC_Os09g24200 | Os09g0407200 | - | Detail |
| C2H9g02820 | 9:12,077,052-12,082,880 | - | C1H9g23904 | CX9g057203 | LOC_Os09g24210 | Os09g0407300 | - | Detail |
| C2H9g29912 | 9:12,088,819-12,097,627 | + | C1H9g02293 | CX9g055864 | LOC_Os09g24220 | Os09g0407600 | OsMSH6 | Detail |
| C2H9g01717 | 9:12,098,560-12,100,597 | - | C1H9g08629 | CX9g056314 | LOC_Os09g24230 | Os09g0407700 | - | Detail |
| C2H9g04820 | 9:12,105,365-12,110,209 | - | C1H9g08004 | CX9g055255 | LOC_Os09g24250 | Os09g0407900 | - | Detail |
| C2H9g21364 | 9:12,115,252-12,127,451 | + | C1H9g20631 | CX9g056605 | LOC_Os09g24260 | Os09g0408000 | - | Detail |
| C2H9g07349 | 9:12,146,594-12,150,689 | + | C1H9g14259 | CX10g008425 | LOC_Os09g24290 | Os09g0408300 | - | Detail |
| C2H9g01448 | 9:12,167,118-12,167,807 | + | C1H9g31260 | CX9g055135 | LOC_Os09g24310 | Os09g0408550 | - | Detail |
| C2H9g08954 | 9:12,168,443-12,171,174 | - | C1H9g05602 | CX9g058200 | LOC_Os09g24320 | Os09g0408600 | - | Detail |
| C2H9g03900 | 9:12,177,093-12,178,180 | + | C1H9g31476 | CX9g055752 | LOC_Os09g24330 | Os09g0551201 | SDK1 | Detail |
| C2H9g12250 | 9:12,185,495-12,186,697 | + | C1H9g18300 | CX9g057158 | LOC_Os09g24330 | Os09g0408900 | - | Detail |
| C2H9g10480 | 9:12,208,313-12,224,837 | + | C1H9g04735 | CX9g057897 | LOC_Os09g24440 | Os09g0410300 | TAF2 | Detail |
| C2H9g06736 | 9:12,226,374-12,234,026 | + | C1H9g12574 | CX9g055674 | - | Os09g0410400 | - | Detail |
| C2H9g10864 | 9:12,259,086-12,259,848 | + | C1H9g03911 | CX9g056790 | - | - | - | Detail |
| C2H9g24788 | 9:12,264,548-12,266,942 | - | C1H9g20900 | CX9g058102 | LOC_Os09g24490 | Os09g0410700 | - | Detail |
| C2H9g22733 | 9:12,276,692-12,277,856 | + | C1H9g20141 | CX9g055159 | - | - | - | Detail |
| C2H9g26695 | 9:12,280,841-12,281,761 | - | C1H9g04476 | CX9g057630 | LOC_Os09g28820 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024271 | 2:24,246,430-24,248,912 | + | C1H2g22786 | C2H2g11300 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| CX2g020293 | 2:24,250,145-24,255,394 | - | C1H2g07582 | C2H2g09061 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| CX2g019582 | 2:24,261,256-24,263,660 | - | C1H2g22254 | C2H2g25954 | LOC_Os02g43250 | Os02g0647300 | - | Detail |
| CX2g023905 | 2:24,271,984-24,272,601 | - | - | - | - | - | - | Detail |
| CX2g024426 | 2:24,276,338-24,281,322 | + | C1H2g05654 | C2H2g12985 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| CX2g021973 | 2:24,286,480-24,287,680 | - | C1H2g13691 | C2H2g29445 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| CX2g020713 | 2:24,295,134-24,298,196 | - | C1H2g15207 | C2H2g03827 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| CX2g023171 | 2:24,305,475-24,305,879 | + | - | - | - | - | - | Detail |
| CX2g023500 | 2:24,317,441-24,317,614 | + | - | - | - | - | - | Detail |
| CX2g024370 | 2:24,318,659-24,319,111 | + | - | - | LOC_Os02g43314 | Os02g0648900 | - | Detail |
| CX2g023474 | 2:24,325,101-24,325,355 | + | - | - | - | - | - | Detail |
| CX2g020717 | 2:24,326,246-24,326,525 | - | C1H5g09160 | C2H5g11007 | LOC_Os02g43320 | - | - | Detail |
| CX2g019169 | 2:24,334,967-24,335,737 | + | C1H2g25916 | C2H2g11895 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| CX2g021953 | 2:24,340,077-24,344,405 | - | C1H2g29202 | C2H2g11536 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| CX2g020014 | 2:24,347,175-24,347,369 | + | - | C2H2g22971 | - | - | - | Detail |
| CX2g021451 | 2:24,349,366-24,355,113 | + | C1H2g22654 | C2H2g04607 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| CX2g024526 | 2:24,356,303-24,356,985 | - | C1H2g29127 | C2H2g04813 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| CX2g022915 | 2:24,362,447-24,366,584 | - | C1H2g17207 | C2H2g23002 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| CX2g019779 | 2:24,373,554-24,377,681 | - | C1H2g09379 | C2H2g12264 | LOC_Os02g43410 | Os02g0650300 | - | Detail |
| CX2g022293 | 2:24,380,390-24,380,662 | + | - | C2H2g21909 | LOC_Os02g43420 | - | - | Detail |