| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15170 | 5:20,646,146-20,648,964 | + | C2H5g29168 | CX5g039522 | - | - | - | Detail |
| C1H5g30650 | 5:20,654,270-20,659,494 | + | C2H5g01065 | CX5g037054 | LOC_Os05g43610 | Os05g0512000 | - | Detail |
| C1H5g28010 | 5:20,661,767-20,663,400 | + | C2H5g14988 | CX5g038702 | LOC_Os05g43590 | Os05g0511800 | - | Detail |
| C1H5g12550 | 5:20,664,428-20,667,136 | - | C2H5g08259 | CX5g037699 | LOC_Os05g43582 | Os05g0511700 | - | Detail |
| C1H5g02902 | 5:20,668,097-20,670,188 | - | C2H5g13482 | CX5g037939 | LOC_Os05g43576 | Os05g0511500 | - | Detail |
| C1H5g20408 | 5:20,673,211-20,673,846 | - | C2H10g16136 | - | - | - | - | Detail |
| C1H5g23395 | 5:20,675,906-20,683,777 | + | C2H5g00019 | CX5g039648 | LOC_Os05g43570 | Os05g0511400 | - | Detail |
| C1H5g31163 | 5:20,684,387-20,693,882 | + | C2H5g01181 | CX5g038876 | LOC_Os05g43560 | Os05g0511300 | - | Detail |
| C1H5g31608 | 5:20,696,464-20,697,765 | - | C2H5g05981 | CX5g038504 | LOC_Os05g43550 | Os05g0511050 | - | Detail |
| C1H5g23826 | 5:20,702,998-20,705,827 | - | C2H5g08192 | CX5g036939 | LOC_Os05g43540 | Os05g0511000 | - | Detail |
| C1H5g22389 | 5:20,714,273-20,714,908 | + | C2H10g16136 | - | - | - | - | Detail |
| C1H5g01984 | 5:20,715,199-20,718,871 | + | C2H5g06890 | CX5g041060 | LOC_Os05g43530 | Os05g0510800 | OsCSLC7 | Detail |
| C1H5g13246 | 5:20,720,651-20,724,353 | - | C2H5g29614 | CX5g039667 | LOC_Os05g43520 | Os05g0510700 | - | Detail |
| C1H5g03553 | 5:20,727,482-20,728,000 | + | C2H5g06953 | CX5g040965 | LOC_Os05g43640 | Os05g0512100 | - | Detail |
| C1H5g21736 | 5:20,730,709-20,733,478 | + | C2H5g26211 | CX5g040742 | LOC_Os05g43650 | Os05g0512200 | - | Detail |
| C1H5g03468 | 5:20,736,103-20,736,477 | - | C2H5g29981 | - | LOC_Os05g43660 | Os05g0512301 | - | Detail |
| C1H5g20040 | 5:20,739,046-20,740,377 | - | C2H5g13083 | CX5g040726 | LOC_Os05g43670 | Os05g0512400 | - | Detail |
| C1H5g16395 | 5:20,740,414-20,740,625 | - | - | - | - | - | - | Detail |
| C1H5g16936 | 5:20,741,445-20,745,241 | - | C2H5g21303 | - | LOC_Os05g43680 | Os05g0512500 | OsMRGBP | Detail |
| C1H5g08173 | 5:20,749,479-20,751,961 | + | C2H5g03611 | CX5g037888 | LOC_Os05g43690 | Os05g0512600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024271 | 2:24,246,430-24,248,912 | + | C1H2g22786 | C2H2g11300 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| CX2g020293 | 2:24,250,145-24,255,394 | - | C1H2g07582 | C2H2g09061 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| CX2g019582 | 2:24,261,256-24,263,660 | - | C1H2g22254 | C2H2g25954 | LOC_Os02g43250 | Os02g0647300 | - | Detail |
| CX2g023905 | 2:24,271,984-24,272,601 | - | - | - | - | - | - | Detail |
| CX2g024426 | 2:24,276,338-24,281,322 | + | C1H2g05654 | C2H2g12985 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| CX2g021973 | 2:24,286,480-24,287,680 | - | C1H2g13691 | C2H2g29445 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| CX2g020713 | 2:24,295,134-24,298,196 | - | C1H2g15207 | C2H2g03827 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| CX2g023171 | 2:24,305,475-24,305,879 | + | - | - | - | - | - | Detail |
| CX2g023500 | 2:24,317,441-24,317,614 | + | - | - | - | - | - | Detail |
| CX2g024370 | 2:24,318,659-24,319,111 | + | - | - | LOC_Os02g43314 | Os02g0648900 | - | Detail |
| CX2g023474 | 2:24,325,101-24,325,355 | + | - | - | - | - | - | Detail |
| CX2g020717 | 2:24,326,246-24,326,525 | - | C1H5g09160 | C2H5g11007 | LOC_Os02g43320 | - | - | Detail |
| CX2g019169 | 2:24,334,967-24,335,737 | + | C1H2g25916 | C2H2g11895 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| CX2g021953 | 2:24,340,077-24,344,405 | - | C1H2g29202 | C2H2g11536 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| CX2g020014 | 2:24,347,175-24,347,369 | + | - | C2H2g22971 | - | - | - | Detail |
| CX2g021451 | 2:24,349,366-24,355,113 | + | C1H2g22654 | C2H2g04607 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| CX2g024526 | 2:24,356,303-24,356,985 | - | C1H2g29127 | C2H2g04813 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| CX2g022915 | 2:24,362,447-24,366,584 | - | C1H2g17207 | C2H2g23002 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| CX2g019779 | 2:24,373,554-24,377,681 | - | C1H2g09379 | C2H2g12264 | LOC_Os02g43410 | Os02g0650300 | - | Detail |
| CX2g022293 | 2:24,380,390-24,380,662 | + | - | C2H2g21909 | LOC_Os02g43420 | - | - | Detail |