| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05108 | 3:4,707,270-4,710,116 | + | C1H3g14289 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C2H3g04674 | 3:4,711,100-4,713,323 | - | C1H3g07517 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| C2H3g27684 | 3:4,714,151-4,716,867 | + | C1H3g08866 | CX3g025008 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| C2H3g15317 | 3:4,716,730-4,720,061 | - | C1H3g26823 | CX3g027908 | LOC_Os03g10469 | Os03g0201800 | - | Detail |
| C2H3g07444 | 3:4,720,624-4,725,054 | - | C1H3g22443 | CX3g027908 | LOC_Os03g10478 | Os03g0201901 | - | Detail |
| C2H3g09161 | 3:4,730,604-4,734,181 | - | C1H3g14443 | CX3g028036 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| C2H3g24025 | 3:4,736,414-4,740,022 | - | C1H3g22113 | CX3g026152 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| C2H3g13194 | 3:4,741,051-4,745,017 | - | C1H3g27837 | CX3g030169 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| C2H3g17561 | 3:4,746,437-4,749,472 | - | C1H3g27666 | CX3g025689 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| C2H3g21513 | 3:4,752,859-4,759,444 | + | C1H3g27625 | CX3g029844 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| C2H3g08169 | 3:4,771,694-4,772,873 | + | C1H3g03653 | CX3g027943 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| C2H3g27974 | 3:4,783,031-4,789,961 | + | C1H3g22146 | CX3g027605 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| C2H3g08201 | 3:4,792,026-4,793,503 | - | C1H3g29891 | CX3g028482 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| C2H3g30001 | 3:4,812,950-4,817,305 | + | C1H3g06442 | CX3g026677 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| C2H3g23547 | 3:4,820,796-4,821,985 | + | C1H3g30369 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g15767 | 3:4,829,271-4,829,690 | - | C1H3g08546 | - | LOC_Os03g10710 | Os03g0204500 | - | Detail |
| C2H3g08384 | 3:4,832,991-4,834,679 | + | C1H3g00980 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g07827 | 3:4,838,784-4,841,678 | + | C1H3g16112 | CX3g030767 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| C2H3g15453 | 3:4,842,534-4,842,952 | - | C1H3g05329 | - | LOC_Os03g10740 | Os03g0204900 | - | Detail |
| C2H3g17885 | 3:4,844,672-4,850,468 | - | C1H3g13244 | CX3g028803 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023583 | 2:23,682,003-23,694,678 | - | C1H2g09804 | C2H2g28320 | LOC_Os02g42200 | Os02g0633100 | - | Detail |
| CX2g019180 | 2:23,695,077-23,696,444 | + | C1H2g30265 | C2H2g22937 | LOC_Os02g42210 | Os02g0633200 | - | Detail |
| CX2g022588 | 2:23,701,767-23,706,274 | + | C1H2g15016 | C2H2g18279 | LOC_Os02g42220 | Os02g0633300 | - | Detail |
| CX2g019057 | 2:23,718,652-23,721,371 | - | C1H2g19667 | C2H2g28681 | LOC_Os02g42280 | Os02g0634100 | - | Detail |
| CX2g022049 | 2:23,726,355-23,727,251 | + | C1H2g16676 | C2H2g15131 | LOC_Os02g42290 | Os02g0634500 | - | Detail |
| CX2g024308 | 2:23,729,906-23,732,611 | + | C1H2g14476 | C2H2g23468 | LOC_Os02g42300 | Os02g0634600 | - | Detail |
| CX2g021521 | 2:23,738,132-23,744,971 | + | C1H2g24689 | C2H2g19464 | LOC_Os02g42310 | Os02g0634700 | - | Detail |
| CX2g024678 | 2:23,749,462-23,753,597 | + | C1H2g19295 | C2H2g01562 | LOC_Os02g42320 | Os02g0634900 | - | Detail |
| CX2g022738 | 2:23,754,791-23,757,795 | + | C1H2g29397 | C2H2g00462 | LOC_Os02g42330 | Os02g0635000 | OsNIT2, OsNIT4B | Detail |
| CX2g021747 | 2:23,758,542-23,761,901 | + | C1H2g04219 | C2H2g22410 | LOC_Os02g42350 | Os02g0635200 | OsNIT1, OsNIT4A | Detail |
| CX2g021927 | 2:23,764,086-23,768,389 | + | C1H2g12016 | C2H2g00675 | LOC_Os02g42370 | Os02g0214633 | - | Detail |
| CX2g019106 | 2:23,768,846-23,770,798 | + | C1H2g12016 | C2H2g19311 | LOC_Os02g42374 | Os02g0635700 | - | Detail |
| CX2g019266 | 2:23,777,568-23,778,200 | + | - | C2H2g06973 | LOC_Os02g42380 | Os02g0635800 | OsTCP4 | Detail |
| CX2g020313 | 2:23,786,439-23,786,630 | + | C1H3g14036 | C2H3g26156 | LOC_Os02g42400 | Os03g0219500 | - | Detail |
| CX2g020718 | 2:23,788,910-23,791,292 | - | C1H2g05908 | C2H2g23612 | LOC_Os02g42406 | Os02g0636300 | - | Detail |
| CX2g020431 | 2:23,792,655-23,795,063 | - | C1H2g22031 | C2H2g00476 | LOC_Os02g42412 | Os02g0636400 | - | Detail |
| CX2g024352 | 2:23,798,704-23,798,961 | - | - | - | - | - | - | Detail |
| CX2g020765 | 2:23,801,991-23,802,911 | - | C1H2g23578 | C2H2g02708 | LOC_Os02g42430 | Os02g0636600 | - | Detail |
| CX2g021056 | 2:23,806,662-23,807,713 | - | C1H2g27721 | C2H2g02768 | LOC_Os02g42440 | Os02g0636700 | - | Detail |
| CX2g021078 | 2:23,816,186-23,816,764 | + | - | C2H2g16910 | LOC_Os02g42450 | Os02g0637000 | - | Detail |