| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g00379 | 7:6,323,884-6,327,447 | - | C1H7g27988 | CX7g048858 | LOC_Os07g12630 | Os07g0229700 | - | Detail |
| C2H7g06660 | 7:6,329,748-6,330,205 | - | C1H7g24986 | CX7g047347 | LOC_Os07g12640 | - | - | Detail |
| C2H7g04906 | 7:6,330,297-6,331,961 | - | C1H7g24986 | CX7g047347 | LOC_Os07g12640 | Os07g0229800 | - | Detail |
| C2H7g00782 | 7:6,332,818-6,334,374 | - | C1H7g01149 | CX7g050341 | LOC_Os07g05580 | Os07g0229900 | - | Detail |
| C2H7g28410 | 7:6,336,530-6,338,232 | - | C1H7g24016 | CX7g047891 | LOC_Os07g12710 | Os07g0230500 | - | Detail |
| C2H7g17771 | 7:6,342,996-6,347,190 | + | - | CX7g046619 | LOC_Os12g19430 | - | - | Detail |
| C2H7g00199 | 7:6,354,525-6,356,299 | + | - | CX7g047216 | LOC_Os12g14930 | - | - | Detail |
| C2H7g11080 | 7:6,385,319-6,385,726 | + | - | CX7g047236 | LOC_Os07g12720 | Os07g0230600 | - | Detail |
| C2H7g22553 | 7:6,388,086-6,390,154 | - | C1H7g13957 | CX7g048372 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C2H7g12068 | 7:6,405,413-6,407,908 | - | C1H7g06206 | CX7g048469 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C2H7g07498 | 7:6,410,610-6,411,943 | - | C1H7g01657 | CX7g048178 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C2H7g25161 | 7:6,416,575-6,417,123 | - | - | - | - | - | - | Detail |
| C2H7g27371 | 7:6,417,824-6,418,275 | - | - | - | - | - | - | Detail |
| C2H7g26762 | 7:6,420,752-6,423,063 | + | C1H7g03693 | CX7g049891 | LOC_Os07g12770 | Os07g0231400 | - | Detail |
| C2H7g12739 | 7:6,423,954-6,426,554 | + | C1H7g18530 | CX7g047049 | LOC_Os07g12780 | Os07g0231500 | - | Detail |
| C2H7g07401 | 7:6,427,746-6,428,495 | + | - | CX7g047049 | LOC_Os07g12780 | Os07g0231500 | - | Detail |
| C2H7g21143 | 7:6,431,988-6,432,353 | + | - | CX7g047048 | LOC_Os07g12790 | Os07g0231700 | - | Detail |
| C2H7g02381 | 7:6,436,545-6,438,106 | + | C1H7g08963 | CX7g049201 | LOC_Os07g12800 | Os07g0231800 | - | Detail |
| C2H7g12874 | 7:6,442,720-6,448,345 | - | C1H7g02116 | CX7g048910 | LOC_Os07g12810 | Os07g0231900 | - | Detail |
| C2H7g30315 | 7:6,456,829-6,457,648 | - | C1H7g06867 | CX7g049933 | LOC_Os07g12820 | Os07g0232100 | OsREM20 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021232 | 2:23,486,060-23,486,386 | - | - | - | - | - | - | Detail |
| CX2g022423 | 2:23,492,111-23,495,619 | + | C1H2g18314 | C2H2g09411 | LOC_Os02g41860 | Os02g0629200 | OsPIP2;2 | Detail |
| CX2g024311 | 2:23,497,701-23,500,844 | - | C1H2g01974 | C2H2g16051 | LOC_Os02g41890 | Os02g0629400 | OsPSKR1 | Detail |
| CX2g022710 | 2:23,512,701-23,514,687 | + | C1H2g31775 | - | - | - | - | Detail |
| CX2g024249 | 2:23,515,835-23,518,520 | + | C1H2g07403 | C2H2g27876 | LOC_Os02g41904 | Os02g0629800 | CAL1, OsDEF7 | Detail |
| CX2g021065 | 2:23,521,124-23,522,236 | + | C1H2g18657 | C2H2g08486 | LOC_Os02g41930 | Os02g0630000 | - | Detail |
| CX2g019866 | 2:23,522,638-23,523,258 | - | - | C2H2g02866 | LOC_Os02g41940 | Os02g0630250 | - | Detail |
| CX2g023936 | 2:23,528,380-23,532,799 | - | C1H2g25377 | C2H2g26818 | LOC_Os02g41954 | Os02g0630300 | OsGA2ox9 | Detail |
| CX2g019860 | 2:23,536,872-23,537,305 | + | - | - | - | - | - | Detail |
| CX2g024050 | 2:23,561,110-23,561,550 | + | C1H2g28250 | C2H2g20874 | LOC_Os02g41980 | Os02g0685900 | OsCPK5 | Detail |
| CX2g023391 | 2:23,564,162-23,568,106 | + | C1H2g23091 | C2H2g03348 | LOC_Os02g41990 | Os02g0631000 | - | Detail |
| CX2g021046 | 2:23,572,039-23,573,172 | + | C1H2g14795 | C2H2g04153 | LOC_Os02g42000 | Os02g0631100 | - | Detail |
| CX2g021591 | 2:23,575,135-23,579,038 | - | C1H2g15067 | C2H2g07998 | LOC_Os02g42020 | Os02g0631200 | - | Detail |
| CX2g022321 | 2:23,591,325-23,591,561 | - | - | - | - | - | - | Detail |
| CX2g020065 | 2:23,595,278-23,605,049 | - | C1H2g17736 | C2H2g11029 | LOC_Os02g42040 | Os02g0631500 | - | Detail |
| CX2g020722 | 2:23,607,238-23,608,106 | - | C1H2g09662 | C2H2g14005 | LOC_Os02g42060 | Os02g0631700 | RR11, OsRR11, Rra8, OsRRA8 | Detail |
| CX2g019329 | 2:23,614,079-23,614,237 | - | C1H2g01302 | C2H2g02788 | - | - | - | Detail |
| CX2g024149 | 2:23,618,361-23,623,221 | + | C1H2g09889 | C2H2g13888 | LOC_Os02g42110 | Os02g0632100 | OsWee1 | Detail |
| CX2g018912 | 2:23,632,911-23,643,924 | + | C1H2g27363 | C2H2g06827 | LOC_Os02g42134 | Os02g0632500 | - | Detail |
| CX2g024172 | 2:23,651,630-23,651,901 | + | - | - | - | - | - | Detail |