| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g11007 | 5:21,751,839-21,754,410 | + | C1H5g09160 | CX2g020717 | LOC_Os05g44550 | - | - | Detail |
| C2H5g01580 | 5:21,756,862-21,764,434 | - | C1H5g15943 | CX5g037570 | LOC_Os05g44560 | Os05g0397900 | - | Detail |
| C2H5g06721 | 5:21,766,922-21,769,347 | - | C1H5g15028 | CX5g040762 | LOC_Os05g44570 | Os05g0521300 | - | Detail |
| C2H5g11284 | 5:21,773,403-21,776,983 | + | C1H5g27271 | CX5g040709 | - | Os05g0521400 | - | Detail |
| C2H5g26977 | 5:21,779,250-21,784,672 | + | C1H5g22714 | CX5g039109 | LOC_Os05g44590 | Os05g0521500 | - | Detail |
| C2H5g14641 | 5:21,786,344-21,789,447 | + | C1H5g12005 | CX5g038255 | LOC_Os05g44600 | Os05g0521600 | - | Detail |
| C2H5g07449 | 5:21,792,000-21,793,025 | + | - | CX5g041159 | - | - | - | Detail |
| C2H5g18579 | 5:21,797,866-21,800,923 | - | C1H5g04739 | CX5g036755 | LOC_Os05g44630 | Os05g0521900 | - | Detail |
| C2H5g21908 | 5:21,808,786-21,813,508 | + | C1H5g28062 | CX5g037506 | LOC_Os05g44760 | Os05g0522500 | OsHXK5 | Detail |
| C2H5g17737 | 5:21,813,433-21,817,047 | - | C1H5g03113 | CX5g036790 | LOC_Os05g44770 | Os05g0522600 | - | Detail |
| C2H5g20123 | 5:21,819,482-21,820,186 | - | C1H5g12912 | CX5g037587 | LOC_Os05g44780 | Os05g0522700 | - | Detail |
| C2H5g25706 | 5:21,826,958-21,829,361 | - | C1H5g11095 | CX5g039399 | LOC_Os05g44810 | Os05g0523300 | OsIAA18 | Detail |
| C2H5g29240 | 5:21,833,026-21,833,625 | - | - | - | - | - | - | Detail |
| C2H5g29517 | 5:21,842,261-21,845,584 | - | C1H5g00746 | CX5g039562 | LOC_Os05g44910 | Os05g0524200 | - | Detail |
| C2H5g22943 | 5:21,847,513-21,851,102 | + | C1H5g24165 | CX5g038177 | LOC_Os05g44916 | Os05g0524300 | - | Detail |
| C2H5g10764 | 5:21,852,551-21,857,283 | + | C1H5g22941 | CX5g039367 | LOC_Os05g44922 | Os05g0524400 | - | Detail |
| C2H5g04969 | 5:21,858,199-21,861,002 | + | C1H5g02947 | CX5g040988 | LOC_Os05g44930 | Os05g0524500 | - | Detail |
| C2H5g15304 | 5:21,861,404-21,862,958 | + | C1H5g09944 | CX5g040988 | LOC_Os05g44930 | Os05g0524500 | - | Detail |
| C2H5g08028 | 5:21,866,062-21,867,048 | + | C1H5g25393 | CX5g040988 | LOC_Os05g44940 | Os05g0524600 | - | Detail |
| C2H5g12376 | 5:21,868,189-21,870,257 | + | C1H5g09028 | CX5g040988 | LOC_Os05g44940 | Os05g0524600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021232 | 2:23,486,060-23,486,386 | - | - | - | - | - | - | Detail |
| CX2g022423 | 2:23,492,111-23,495,619 | + | C1H2g18314 | C2H2g09411 | LOC_Os02g41860 | Os02g0629200 | OsPIP2;2 | Detail |
| CX2g024311 | 2:23,497,701-23,500,844 | - | C1H2g01974 | C2H2g16051 | LOC_Os02g41890 | Os02g0629400 | OsPSKR1 | Detail |
| CX2g022710 | 2:23,512,701-23,514,687 | + | C1H2g31775 | - | - | - | - | Detail |
| CX2g024249 | 2:23,515,835-23,518,520 | + | C1H2g07403 | C2H2g27876 | LOC_Os02g41904 | Os02g0629800 | CAL1, OsDEF7 | Detail |
| CX2g021065 | 2:23,521,124-23,522,236 | + | C1H2g18657 | C2H2g08486 | LOC_Os02g41930 | Os02g0630000 | - | Detail |
| CX2g019866 | 2:23,522,638-23,523,258 | - | - | C2H2g02866 | LOC_Os02g41940 | Os02g0630250 | - | Detail |
| CX2g023936 | 2:23,528,380-23,532,799 | - | C1H2g25377 | C2H2g26818 | LOC_Os02g41954 | Os02g0630300 | OsGA2ox9 | Detail |
| CX2g019860 | 2:23,536,872-23,537,305 | + | - | - | - | - | - | Detail |
| CX2g024050 | 2:23,561,110-23,561,550 | + | C1H2g28250 | C2H2g20874 | LOC_Os02g41980 | Os02g0685900 | OsCPK5 | Detail |
| CX2g023391 | 2:23,564,162-23,568,106 | + | C1H2g23091 | C2H2g03348 | LOC_Os02g41990 | Os02g0631000 | - | Detail |
| CX2g021046 | 2:23,572,039-23,573,172 | + | C1H2g14795 | C2H2g04153 | LOC_Os02g42000 | Os02g0631100 | - | Detail |
| CX2g021591 | 2:23,575,135-23,579,038 | - | C1H2g15067 | C2H2g07998 | LOC_Os02g42020 | Os02g0631200 | - | Detail |
| CX2g022321 | 2:23,591,325-23,591,561 | - | - | - | - | - | - | Detail |
| CX2g020065 | 2:23,595,278-23,605,049 | - | C1H2g17736 | C2H2g11029 | LOC_Os02g42040 | Os02g0631500 | - | Detail |
| CX2g020722 | 2:23,607,238-23,608,106 | - | C1H2g09662 | C2H2g14005 | LOC_Os02g42060 | Os02g0631700 | RR11, OsRR11, Rra8, OsRRA8 | Detail |
| CX2g019329 | 2:23,614,079-23,614,237 | - | C1H2g01302 | C2H2g02788 | - | - | - | Detail |
| CX2g024149 | 2:23,618,361-23,623,221 | + | C1H2g09889 | C2H2g13888 | LOC_Os02g42110 | Os02g0632100 | OsWee1 | Detail |
| CX2g018912 | 2:23,632,911-23,643,924 | + | C1H2g27363 | C2H2g06827 | LOC_Os02g42134 | Os02g0632500 | - | Detail |
| CX2g024172 | 2:23,651,630-23,651,901 | + | - | - | - | - | - | Detail |