| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g29556 | 1:20,743,795-20,767,898 | + | C2H1g25414 | CX1g003687 | LOC_Os01g40990 | Os01g0593000 | - | Detail |
| C1H1g06508 | 1:20,768,797-20,769,110 | - | C2H1g19698 | CX1g001975 | LOC_Os01g41000 | Os01g0593100 | - | Detail |
| C1H1g00280 | 1:20,769,138-20,769,446 | - | C2H1g01091 | CX1g001975 | LOC_Os01g41000 | Os01g0593100 | - | Detail |
| C1H1g24663 | 1:20,779,564-20,781,001 | + | C2H1g26660 | CX1g001665 | LOC_Os01g41010 | Os01g0593200 | OsFLZ2 | Detail |
| C1H1g03158 | 1:20,790,010-20,792,594 | - | C2H1g01729 | CX1g004416 | LOC_Os01g41030 | Os01g0593500 | - | Detail |
| C1H1g00408 | 1:20,794,714-20,798,963 | + | C2H1g24057 | CX1g000381 | LOC_Os01g41040 | Os01g0593600 | - | Detail |
| C1H1g30494 | 1:20,802,856-20,805,826 | + | C2H1g09012 | CX1g001186 | LOC_Os01g41050 | Os01g0593700 | - | Detail |
| C1H1g21011 | 1:20,821,342-20,823,045 | + | C2H1g27683 | CX1g002572 | LOC_Os01g41120 | Os01g0594300 | - | Detail |
| C1H1g11707 | 1:20,826,533-20,827,132 | - | C2H1g09622 | CX1g005324 | LOC_Os01g41140 | Os01g0594500 | - | Detail |
| C1H1g08414 | 1:20,834,394-20,834,943 | + | C2H1g25093 | - | - | Os01g0594650 | - | Detail |
| C1H1g05215 | 1:20,837,761-20,840,023 | - | C2H1g01408 | CX1g000117 | LOC_Os11g10490 | Os01g0807000 | - | Detail |
| C1H1g21953 | 1:20,866,573-20,867,770 | - | C2H1g06797 | CX1g000989 | LOC_Os01g41160 | Os01g0594800 | - | Detail |
| C1H1g13912 | 1:20,872,783-20,873,762 | - | C2H1g12627 | CX1g000945 | LOC_Os01g41170 | Os01g0594900 | - | Detail |
| C1H1g21945 | 1:20,881,259-20,887,924 | + | C2H1g12390 | CX1g000070 | LOC_Os01g41190 | Os01g0595100 | - | Detail |
| C1H1g29329 | 1:20,889,848-20,890,499 | + | C2H1g04960 | CX1g002506 | LOC_Os01g41200 | Os01g0595201 | - | Detail |
| C1H1g29839 | 1:20,896,800-20,897,279 | + | C2H1g30431 | CX1g006784 | LOC_Os01g41220 | Os01g0595400 | - | Detail |
| C1H1g21495 | 1:20,907,147-20,908,978 | + | C2H1g07569 | CX1g003431 | LOC_Os01g41240 | Os01g0595600 | - | Detail |
| C1H1g21074 | 1:20,910,776-20,912,343 | + | C2H1g01959 | CX1g004325 | LOC_Os01g41250 | Os01g0595700 | OsRALyase1 | Detail |
| C1H1g18710 | 1:20,914,811-20,917,942 | + | C2H1g20361 | CX1g000177 | LOC_Os01g41260 | Os01g0595800 | - | Detail |
| C1H1g23965 | 1:20,918,550-20,920,422 | + | C2H1g04509 | CX1g000177 | LOC_Os01g41270 | Os01g0595900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021232 | 2:23,486,060-23,486,386 | - | - | - | - | - | - | Detail |
| CX2g022423 | 2:23,492,111-23,495,619 | + | C1H2g18314 | C2H2g09411 | LOC_Os02g41860 | Os02g0629200 | OsPIP2;2 | Detail |
| CX2g024311 | 2:23,497,701-23,500,844 | - | C1H2g01974 | C2H2g16051 | LOC_Os02g41890 | Os02g0629400 | OsPSKR1 | Detail |
| CX2g022710 | 2:23,512,701-23,514,687 | + | C1H2g31775 | - | - | - | - | Detail |
| CX2g024249 | 2:23,515,835-23,518,520 | + | C1H2g07403 | C2H2g27876 | LOC_Os02g41904 | Os02g0629800 | CAL1, OsDEF7 | Detail |
| CX2g021065 | 2:23,521,124-23,522,236 | + | C1H2g18657 | C2H2g08486 | LOC_Os02g41930 | Os02g0630000 | - | Detail |
| CX2g019866 | 2:23,522,638-23,523,258 | - | - | C2H2g02866 | LOC_Os02g41940 | Os02g0630250 | - | Detail |
| CX2g023936 | 2:23,528,380-23,532,799 | - | C1H2g25377 | C2H2g26818 | LOC_Os02g41954 | Os02g0630300 | OsGA2ox9 | Detail |
| CX2g019860 | 2:23,536,872-23,537,305 | + | - | - | - | - | - | Detail |
| CX2g024050 | 2:23,561,110-23,561,550 | + | C1H2g28250 | C2H2g20874 | LOC_Os02g41980 | Os02g0685900 | OsCPK5 | Detail |
| CX2g023391 | 2:23,564,162-23,568,106 | + | C1H2g23091 | C2H2g03348 | LOC_Os02g41990 | Os02g0631000 | - | Detail |
| CX2g021046 | 2:23,572,039-23,573,172 | + | C1H2g14795 | C2H2g04153 | LOC_Os02g42000 | Os02g0631100 | - | Detail |
| CX2g021591 | 2:23,575,135-23,579,038 | - | C1H2g15067 | C2H2g07998 | LOC_Os02g42020 | Os02g0631200 | - | Detail |
| CX2g022321 | 2:23,591,325-23,591,561 | - | - | - | - | - | - | Detail |
| CX2g020065 | 2:23,595,278-23,605,049 | - | C1H2g17736 | C2H2g11029 | LOC_Os02g42040 | Os02g0631500 | - | Detail |
| CX2g020722 | 2:23,607,238-23,608,106 | - | C1H2g09662 | C2H2g14005 | LOC_Os02g42060 | Os02g0631700 | RR11, OsRR11, Rra8, OsRRA8 | Detail |
| CX2g019329 | 2:23,614,079-23,614,237 | - | C1H2g01302 | C2H2g02788 | - | - | - | Detail |
| CX2g024149 | 2:23,618,361-23,623,221 | + | C1H2g09889 | C2H2g13888 | LOC_Os02g42110 | Os02g0632100 | OsWee1 | Detail |
| CX2g018912 | 2:23,632,911-23,643,924 | + | C1H2g27363 | C2H2g06827 | LOC_Os02g42134 | Os02g0632500 | - | Detail |
| CX2g024172 | 2:23,651,630-23,651,901 | + | - | - | - | - | - | Detail |