| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g17168 | 3:26,925,068-26,927,470 | + | C1H3g19413 | CX3g030963 | LOC_Os03g51240 | Os03g0722500 | - | Detail |
| C2H3g09804 | 3:26,927,684-26,932,236 | - | C1H3g19235 | CX3g028000 | LOC_Os03g51250 | Os03g0722600 | - | Detail |
| C2H3g23515 | 3:26,960,809-26,961,797 | + | C1H3g19621 | CX3g025582 | LOC_Os03g51340 | - | - | Detail |
| C2H3g08290 | 3:26,966,779-26,967,821 | + | C1H3g18910 | CX3g030020 | LOC_Os03g51350 | Os03g0723400 | - | Detail |
| C2H3g16773 | 3:26,974,616-26,978,336 | + | C1H3g18603 | CX3g027992 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| C2H3g17511 | 3:26,985,490-26,986,662 | - | - | - | - | - | - | Detail |
| C2H3g11512 | 3:27,005,216-27,006,777 | + | C1H3g29238 | CX3g025224 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| C2H3g26453 | 3:27,008,365-27,012,042 | - | C1H3g20683 | CX3g028077 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| C2H3g05139 | 3:27,029,616-27,030,005 | - | C1H3g30120 | CX3g025441 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| C2H3g13019 | 3:27,032,755-27,034,727 | - | C1H3g05968 | CX3g025693 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| C2H3g05753 | 3:27,035,639-27,037,223 | + | C1H3g04363 | CX3g027196 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| C2H3g12890 | 3:27,045,422-27,045,733 | + | C1H3g15090 | CX3g028977 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| C2H3g20716 | 3:27,047,194-27,056,996 | + | C1H3g02037 | CX3g030919 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| C2H3g06290 | 3:27,058,656-27,064,437 | + | C1H3g18345 | CX3g029201 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| C2H3g04142 | 3:27,065,261-27,069,025 | + | C1H3g09008 | CX3g028312 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| C2H3g06970 | 3:27,096,786-27,099,211 | + | C1H3g28685 | CX3g029203 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| C2H3g30221 | 3:27,102,367-27,103,395 | + | - | - | - | - | - | Detail |
| C2H3g21598 | 3:27,113,077-27,116,055 | + | C1H3g18025 | CX3g026793 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| C2H3g10415 | 3:27,122,480-27,128,188 | + | C1H3g31013 | CX3g027533 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| C2H3g30083 | 3:27,130,646-27,135,460 | - | C1H3g03565 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024918 | 2:23,125,421-23,126,701 | - | C1H2g19462 | C2H2g23641 | LOC_Os02g40750 | Os02g0290000 | - | Detail |
| CX2g022252 | 2:23,140,587-23,145,870 | + | C1H2g09682 | C2H2g25432 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| CX2g021587 | 2:23,147,405-23,152,829 | - | C1H2g19949 | C2H2g23211 | LOC_Os02g40784 | Os02g0621300 | OsCER1 | Detail |
| CX2g019928 | 2:23,157,294-23,161,412 | - | C1H2g27103 | C2H2g26983 | LOC_Os02g40810 | Os02g0621500 | - | Detail |
| CX2g022093 | 2:23,168,166-23,168,393 | - | C1H2g19112 | C2H2g10810 | LOC_Os02g40820 | Os02g0621600 | - | Detail |
| CX2g023876 | 2:23,171,696-23,177,139 | + | C1H2g19508 | C2H2g06529 | LOC_Os02g40830 | Os02g0621700 | - | Detail |
| CX2g021578 | 2:23,179,436-23,183,813 | - | C1H2g14578 | C2H2g19681 | LOC_Os02g40840 | Os02g0621800 | HWH1, hwh1 | Detail |
| CX2g024826 | 2:23,189,822-23,194,786 | + | C1H2g29233 | C2H2g04248 | LOC_Os02g40860 | Os02g0622100 | HBD2, OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1 | Detail |
| CX2g019843 | 2:23,196,356-23,197,147 | - | - | C2H2g05625 | LOC_Os02g40870 | Os02g0622200 | - | Detail |
| CX2g020034 | 2:23,199,656-23,200,883 | - | C1H2g26754 | C2H2g00421 | LOC_Os02g40880 | Os02g0622300 | - | Detail |
| CX2g023937 | 2:23,201,885-23,204,231 | + | C1H2g28817 | C2H2g15374 | LOC_Os02g40890 | Os02g0622400 | - | Detail |
| CX2g019570 | 2:23,205,231-23,208,018 | - | C1H2g19529 | C2H2g11747 | LOC_Os02g40900 | Os02g0622500 | - | Detail |
| CX2g020385 | 2:23,221,073-23,224,743 | + | C1H2g10086 | C2H2g13801 | LOC_Os02g41450 | Os02g0623300 | - | Detail |
| CX2g020171 | 2:23,235,529-23,236,203 | + | - | - | - | - | - | Detail |
| CX2g021983 | 2:23,256,214-23,267,748 | - | C1H2g09216 | C2H2g23020 | LOC_Os02g41470 | Os02g0623500 | - | Detail |
| CX2g019549 | 2:23,273,797-23,276,652 | - | C1H2g24692 | C2H2g28960 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| CX2g019867 | 2:23,289,623-23,290,062 | + | - | - | - | - | - | Detail |
| CX2g019713 | 2:23,292,382-23,292,570 | + | - | - | - | - | - | Detail |
| CX2g020985 | 2:23,295,603-23,296,341 | - | C1H2g14607 | C2H2g21291 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| CX2g019605 | 2:23,308,261-23,313,752 | + | C1H2g25292 | C2H2g15398 | LOC_Os02g41520 | Os02g0624400 | - | Detail |