| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g09219 | 7:12,470,486-12,471,938 | + | C1H7g14823 | CX7g047044 | LOC_Os07g26110 | Os07g0442900 | - | Detail |
| C2H7g15140 | 7:12,474,268-12,476,443 | + | - | CX7g047359 | LOC_Os07g38780 | Os07g0554400 | - | Detail |
| C2H7g21033 | 7:12,593,301-12,602,493 | - | C1H7g22404 | CX7g049983 | LOC_Os07g26210 | Os07g0444000 | - | Detail |
| C2H7g15268 | 7:12,617,608-12,622,306 | + | C1H7g14611 | CX7g046951 | LOC_Os07g29820 | Os07g0481400 | - | Detail |
| C2H7g16091 | 7:12,626,731-12,633,506 | - | C1H7g17489 | CX7g048800 | LOC_Os07g26440 | Os07g0445600 | - | Detail |
| C2H7g21985 | 7:12,646,372-12,647,900 | + | C1H7g26287 | CX7g046816 | LOC_Os07g26460 | Os07g0445800 | - | Detail |
| C2H7g23639 | 7:12,652,047-12,653,489 | + | C1H7g01225 | CX7g048464 | LOC_Os07g26480 | Os07g0446000 | - | Detail |
| C2H7g17928 | 7:12,664,890-12,671,789 | - | C1H7g09402 | CX7g049738 | LOC_Os07g26490 | Os07g0446100 | - | Detail |
| C2H7g17685 | 7:12,751,120-12,752,922 | - | C1H7g27839 | CX7g046361 | LOC_Os07g26550 | Os07g0446900 | - | Detail |
| C2H7g24998 | 7:12,769,381-12,770,496 | - | C1H7g27839 | - | LOC_Os07g26550 | Os07g0446900 | - | Detail |
| C2H7g26716 | 7:12,772,427-12,778,030 | - | C1H7g30743 | CX7g047444 | LOC_Os07g26560 | Os07g0447000 | - | Detail |
| C2H7g28153 | 7:12,779,313-12,781,144 | - | C1H7g11360 | - | - | - | - | Detail |
| C2H7g16004 | 7:12,807,794-12,821,690 | + | C1H7g10421 | CX7g046302 | LOC_Os07g26610 | Os07g0447800 | - | Detail |
| C2H7g29828 | 7:12,826,462-12,827,541 | + | C1H7g19669 | CX7g047860 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| C2H7g04872 | 7:12,834,287-12,835,354 | + | C1H7g02013 | CX7g048399 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| C2H7g25955 | 7:12,842,748-12,843,830 | + | C1H7g13570 | CX7g049385 | LOC_Os07g26660 | Os07g0448100 | OsPIP2;4 | Detail |
| C2H7g26880 | 7:12,872,403-12,875,732 | + | C1H7g11593 | CX7g049950 | LOC_Os07g26690 | Os07g0448800 | - | Detail |
| C2H7g23663 | 7:12,884,313-12,885,698 | - | C1H7g07851 | CX7g050322 | LOC_Os07g26700 | Os07g0449100 | - | Detail |
| C2H7g04033 | 7:12,891,307-12,892,655 | - | C1H7g12910 | CX7g048166 | - | - | - | Detail |
| C2H7g19396 | 7:12,910,002-12,911,469 | + | C1H7g22458 | CX7g049783 | LOC_Os07g26720 | Os07g0449700 | RR7, rr7, OsRR7, Rra5, OsRRA5 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024918 | 2:23,125,421-23,126,701 | - | C1H2g19462 | C2H2g23641 | LOC_Os02g40750 | Os02g0290000 | - | Detail |
| CX2g022252 | 2:23,140,587-23,145,870 | + | C1H2g09682 | C2H2g25432 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| CX2g021587 | 2:23,147,405-23,152,829 | - | C1H2g19949 | C2H2g23211 | LOC_Os02g40784 | Os02g0621300 | OsCER1 | Detail |
| CX2g019928 | 2:23,157,294-23,161,412 | - | C1H2g27103 | C2H2g26983 | LOC_Os02g40810 | Os02g0621500 | - | Detail |
| CX2g022093 | 2:23,168,166-23,168,393 | - | C1H2g19112 | C2H2g10810 | LOC_Os02g40820 | Os02g0621600 | - | Detail |
| CX2g023876 | 2:23,171,696-23,177,139 | + | C1H2g19508 | C2H2g06529 | LOC_Os02g40830 | Os02g0621700 | - | Detail |
| CX2g021578 | 2:23,179,436-23,183,813 | - | C1H2g14578 | C2H2g19681 | LOC_Os02g40840 | Os02g0621800 | HWH1, hwh1 | Detail |
| CX2g024826 | 2:23,189,822-23,194,786 | + | C1H2g29233 | C2H2g04248 | LOC_Os02g40860 | Os02g0622100 | HBD2, OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1 | Detail |
| CX2g019843 | 2:23,196,356-23,197,147 | - | - | C2H2g05625 | LOC_Os02g40870 | Os02g0622200 | - | Detail |
| CX2g020034 | 2:23,199,656-23,200,883 | - | C1H2g26754 | C2H2g00421 | LOC_Os02g40880 | Os02g0622300 | - | Detail |
| CX2g023937 | 2:23,201,885-23,204,231 | + | C1H2g28817 | C2H2g15374 | LOC_Os02g40890 | Os02g0622400 | - | Detail |
| CX2g019570 | 2:23,205,231-23,208,018 | - | C1H2g19529 | C2H2g11747 | LOC_Os02g40900 | Os02g0622500 | - | Detail |
| CX2g020385 | 2:23,221,073-23,224,743 | + | C1H2g10086 | C2H2g13801 | LOC_Os02g41450 | Os02g0623300 | - | Detail |
| CX2g020171 | 2:23,235,529-23,236,203 | + | - | - | - | - | - | Detail |
| CX2g021983 | 2:23,256,214-23,267,748 | - | C1H2g09216 | C2H2g23020 | LOC_Os02g41470 | Os02g0623500 | - | Detail |
| CX2g019549 | 2:23,273,797-23,276,652 | - | C1H2g24692 | C2H2g28960 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| CX2g019867 | 2:23,289,623-23,290,062 | + | - | - | - | - | - | Detail |
| CX2g019713 | 2:23,292,382-23,292,570 | + | - | - | - | - | - | Detail |
| CX2g020985 | 2:23,295,603-23,296,341 | - | C1H2g14607 | C2H2g21291 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| CX2g019605 | 2:23,308,261-23,313,752 | + | C1H2g25292 | C2H2g15398 | LOC_Os02g41520 | Os02g0624400 | - | Detail |