| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16020 | 3:12,889,047-12,892,172 | + | C2H3g27128 | CX3g026804 | LOC_Os03g25260 | Os03g0367800 | - | Detail |
| C1H3g25920 | 3:12,897,662-12,899,471 | + | C2H3g07803 | CX3g026151 | LOC_Os03g25270 | Os03g0367900 | - | Detail |
| C1H3g11101 | 3:12,900,845-12,901,921 | - | C2H3g22531 | CX3g025169 | LOC_Os03g25300 | Os03g0368300 | - | Detail |
| C1H3g26587 | 3:12,909,133-12,910,214 | + | C2H3g22531 | CX3g025169 | LOC_Os03g25280 | Os03g0368000 | - | Detail |
| C1H3g14058 | 3:12,912,125-12,913,108 | + | - | - | - | - | - | Detail |
| C1H3g13259 | 3:12,918,278-12,920,038 | + | C2H3g27289 | CX3g025674 | LOC_Os03g25320 | Os03g0368300 | - | Detail |
| C1H3g07302 | 3:12,921,664-12,922,431 | - | C2H3g05845 | CX3g029980 | - | Os03g0699700 | Osr9-LOX1 | Detail |
| C1H3g15720 | 3:12,922,537-12,922,788 | - | C2H3g17436 | CX3g029980 | LOC_Os03g49260 | Os03g0699700 | Osr9-LOX1 | Detail |
| C1H3g14704 | 3:12,923,187-12,926,165 | - | C2H3g17436 | CX3g029980 | - | Os03g0699700 | Osr9-LOX1 | Detail |
| C1H3g26852 | 3:12,942,328-12,943,419 | + | C2H3g12026 | CX3g027878 | LOC_Os03g25330 | Os03g0368900 | - | Detail |
| C1H3g17834 | 3:12,950,367-12,951,909 | + | C2H3g16356 | CX3g025535 | LOC_Os03g25340 | Os03g0369000 | - | Detail |
| C1H3g18190 | 3:12,961,681-12,962,131 | + | C2H3g01197 | - | LOC_Os03g25350 | Os03g0369100 | OsLTPL36, OsCIP1 | Detail |
| C1H3g18951 | 3:12,964,473-12,965,878 | + | C2H3g22819 | CX3g024959 | LOC_Os03g25360 | Os03g0369000 | - | Detail |
| C1H3g00052 | 3:12,992,343-12,993,470 | + | C2H3g12152 | CX3g027308 | LOC_Os03g25370 | Os03g0369000 | - | Detail |
| C1H3g26552 | 3:13,002,460-13,006,145 | - | C2H3g02553 | CX3g027718 | LOC_Os03g25390 | Os03g0369800 | OsNPSN12 | Detail |
| C1H3g05126 | 3:13,017,140-13,020,859 | + | C2H3g10191 | CX3g029883 | LOC_Os03g25400 | Os03g0370000 | - | Detail |
| C1H3g23354 | 3:13,044,174-13,047,328 | + | C2H3g00547 | CX3g031102 | LOC_Os03g25480 | Os03g0370900 | - | Detail |
| C1H3g05051 | 3:13,050,507-13,053,153 | + | C2H3g19651 | CX3g027113 | LOC_Os03g25500 | Os03g0371000 | - | Detail |
| C1H3g00840 | 3:13,059,747-13,060,297 | + | C2H3g04381 | CX3g027113 | LOC_Os03g25500 | Os03g0371300 | - | Detail |
| C1H3g21806 | 3:13,063,203-13,065,886 | + | C2H3g15015 | CX3g031102 | LOC_Os03g25480 | Os03g0371350 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024918 | 2:23,125,421-23,126,701 | - | C1H2g19462 | C2H2g23641 | LOC_Os02g40750 | Os02g0290000 | - | Detail |
| CX2g022252 | 2:23,140,587-23,145,870 | + | C1H2g09682 | C2H2g25432 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| CX2g021587 | 2:23,147,405-23,152,829 | - | C1H2g19949 | C2H2g23211 | LOC_Os02g40784 | Os02g0621300 | OsCER1 | Detail |
| CX2g019928 | 2:23,157,294-23,161,412 | - | C1H2g27103 | C2H2g26983 | LOC_Os02g40810 | Os02g0621500 | - | Detail |
| CX2g022093 | 2:23,168,166-23,168,393 | - | C1H2g19112 | C2H2g10810 | LOC_Os02g40820 | Os02g0621600 | - | Detail |
| CX2g023876 | 2:23,171,696-23,177,139 | + | C1H2g19508 | C2H2g06529 | LOC_Os02g40830 | Os02g0621700 | - | Detail |
| CX2g021578 | 2:23,179,436-23,183,813 | - | C1H2g14578 | C2H2g19681 | LOC_Os02g40840 | Os02g0621800 | HWH1, hwh1 | Detail |
| CX2g024826 | 2:23,189,822-23,194,786 | + | C1H2g29233 | C2H2g04248 | LOC_Os02g40860 | Os02g0622100 | HBD2, OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1 | Detail |
| CX2g019843 | 2:23,196,356-23,197,147 | - | - | C2H2g05625 | LOC_Os02g40870 | Os02g0622200 | - | Detail |
| CX2g020034 | 2:23,199,656-23,200,883 | - | C1H2g26754 | C2H2g00421 | LOC_Os02g40880 | Os02g0622300 | - | Detail |
| CX2g023937 | 2:23,201,885-23,204,231 | + | C1H2g28817 | C2H2g15374 | LOC_Os02g40890 | Os02g0622400 | - | Detail |
| CX2g019570 | 2:23,205,231-23,208,018 | - | C1H2g19529 | C2H2g11747 | LOC_Os02g40900 | Os02g0622500 | - | Detail |
| CX2g020385 | 2:23,221,073-23,224,743 | + | C1H2g10086 | C2H2g13801 | LOC_Os02g41450 | Os02g0623300 | - | Detail |
| CX2g020171 | 2:23,235,529-23,236,203 | + | - | - | - | - | - | Detail |
| CX2g021983 | 2:23,256,214-23,267,748 | - | C1H2g09216 | C2H2g23020 | LOC_Os02g41470 | Os02g0623500 | - | Detail |
| CX2g019549 | 2:23,273,797-23,276,652 | - | C1H2g24692 | C2H2g28960 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| CX2g019867 | 2:23,289,623-23,290,062 | + | - | - | - | - | - | Detail |
| CX2g019713 | 2:23,292,382-23,292,570 | + | - | - | - | - | - | Detail |
| CX2g020985 | 2:23,295,603-23,296,341 | - | C1H2g14607 | C2H2g21291 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| CX2g019605 | 2:23,308,261-23,313,752 | + | C1H2g25292 | C2H2g15398 | LOC_Os02g41520 | Os02g0624400 | - | Detail |