| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g30034 | 3:1,473,834-1,479,587 | + | C2H3g30344 | CX3g026694 | LOC_Os03g03680 | Os03g0128932 | OsAZT3 | Detail |
| C1H3g26756 | 3:1,484,404-1,486,683 | + | C2H3g21860 | CX3g026791 | LOC_Os03g03690 | Os03g0129000 | OsPIG-F, PIG-F | Detail |
| C1H3g08238 | 3:1,487,075-1,490,723 | - | C2H3g23213 | CX3g030210 | LOC_Os03g03700 | Os03g0129100 | - | Detail |
| C1H3g14096 | 3:1,495,192-1,503,539 | - | C2H3g26117 | CX3g028820 | LOC_Os03g03710 | Os03g0129200 | - | Detail |
| C1H3g27982 | 3:1,504,077-1,507,573 | + | C2H3g26797 | CX3g028073 | LOC_Os03g03720 | Os03g0129300 | - | Detail |
| C1H3g08454 | 3:1,509,217-1,509,630 | + | C2H3g27426 | CX3g030443 | - | Os03g0129400 | - | Detail |
| C1H3g20373 | 3:1,509,954-1,512,589 | - | C2H3g07876 | CX3g026210 | LOC_Os03g03730 | Os03g0129800 | - | Detail |
| C1H3g01611 | 3:1,514,016-1,514,345 | - | C2H3g29721 | CX3g026524 | LOC_Os03g03760 | - | - | Detail |
| C1H3g14716 | 3:1,514,497-1,518,794 | - | C2H3g13057 | CX3g026524 | LOC_Os03g03760 | Os03g0624000 | - | Detail |
| C1H3g28130 | 3:1,527,218-1,530,084 | - | - | - | - | Os03g0129850 | - | Detail |
| C1H3g30382 | 3:1,535,201-1,535,536 | - | C2H3g05832 | CX3g030654 | LOC_Os03g03770 | Os03g0129900 | - | Detail |
| C1H3g27546 | 3:1,553,842-1,556,113 | + | C2H3g07821 | CX3g028774 | LOC_Os03g03790 | Os03g0130100 | OsCNL1 | Detail |
| C1H3g09567 | 3:1,558,977-1,559,702 | + | C2H3g09589 | CX3g030766 | LOC_Os03g22700 | - | - | Detail |
| C1H3g01006 | 3:1,562,020-1,562,374 | + | C2H3g10593 | CX3g027416 | LOC_Os03g03810 | Os03g0130300 | OsDEF8 | Detail |
| C1H3g27010 | 3:1,563,645-1,566,964 | + | C2H3g18638 | CX3g029936 | LOC_Os03g03820 | Os03g0130400 | - | Detail |
| C1H3g11205 | 3:1,567,280-1,575,087 | - | C2H3g06449 | CX3g030536 | LOC_Os03g03830 | Os03g0130500 | - | Detail |
| C1H3g17616 | 3:1,579,109-1,583,980 | - | C2H3g20859 | CX3g029509 | LOC_Os03g03860 | Os03g0130700 | - | Detail |
| C1H3g26036 | 3:1,587,982-1,590,312 | - | C2H3g08783 | CX3g029309 | - | Os03g0130750 | - | Detail |
| C1H3g08344 | 3:1,592,535-1,598,584 | + | C2H3g05534 | CX3g026936 | LOC_Os03g03870 | Os03g0130800 | - | Detail |
| C1H3g09568 | 3:1,606,172-1,613,443 | + | C2H3g28810 | CX3g028472 | LOC_Os03g03880 | Os03g0130900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024918 | 2:23,125,421-23,126,701 | - | C1H2g19462 | C2H2g23641 | LOC_Os02g40750 | Os02g0290000 | - | Detail |
| CX2g022252 | 2:23,140,587-23,145,870 | + | C1H2g09682 | C2H2g25432 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| CX2g021587 | 2:23,147,405-23,152,829 | - | C1H2g19949 | C2H2g23211 | LOC_Os02g40784 | Os02g0621300 | OsCER1 | Detail |
| CX2g019928 | 2:23,157,294-23,161,412 | - | C1H2g27103 | C2H2g26983 | LOC_Os02g40810 | Os02g0621500 | - | Detail |
| CX2g022093 | 2:23,168,166-23,168,393 | - | C1H2g19112 | C2H2g10810 | LOC_Os02g40820 | Os02g0621600 | - | Detail |
| CX2g023876 | 2:23,171,696-23,177,139 | + | C1H2g19508 | C2H2g06529 | LOC_Os02g40830 | Os02g0621700 | - | Detail |
| CX2g021578 | 2:23,179,436-23,183,813 | - | C1H2g14578 | C2H2g19681 | LOC_Os02g40840 | Os02g0621800 | HWH1, hwh1 | Detail |
| CX2g024826 | 2:23,189,822-23,194,786 | + | C1H2g29233 | C2H2g04248 | LOC_Os02g40860 | Os02g0622100 | HBD2, OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1 | Detail |
| CX2g019843 | 2:23,196,356-23,197,147 | - | - | C2H2g05625 | LOC_Os02g40870 | Os02g0622200 | - | Detail |
| CX2g020034 | 2:23,199,656-23,200,883 | - | C1H2g26754 | C2H2g00421 | LOC_Os02g40880 | Os02g0622300 | - | Detail |
| CX2g023937 | 2:23,201,885-23,204,231 | + | C1H2g28817 | C2H2g15374 | LOC_Os02g40890 | Os02g0622400 | - | Detail |
| CX2g019570 | 2:23,205,231-23,208,018 | - | C1H2g19529 | C2H2g11747 | LOC_Os02g40900 | Os02g0622500 | - | Detail |
| CX2g020385 | 2:23,221,073-23,224,743 | + | C1H2g10086 | C2H2g13801 | LOC_Os02g41450 | Os02g0623300 | - | Detail |
| CX2g020171 | 2:23,235,529-23,236,203 | + | - | - | - | - | - | Detail |
| CX2g021983 | 2:23,256,214-23,267,748 | - | C1H2g09216 | C2H2g23020 | LOC_Os02g41470 | Os02g0623500 | - | Detail |
| CX2g019549 | 2:23,273,797-23,276,652 | - | C1H2g24692 | C2H2g28960 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| CX2g019867 | 2:23,289,623-23,290,062 | + | - | - | - | - | - | Detail |
| CX2g019713 | 2:23,292,382-23,292,570 | + | - | - | - | - | - | Detail |
| CX2g020985 | 2:23,295,603-23,296,341 | - | C1H2g14607 | C2H2g21291 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| CX2g019605 | 2:23,308,261-23,313,752 | + | C1H2g25292 | C2H2g15398 | LOC_Os02g41520 | Os02g0624400 | - | Detail |