| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g20402 | 10:11,308,925-11,312,136 | + | C1H10g23650 | CX10g008685 | LOC_Os10g22890 | Os10g0375000 | - | Detail |
| C2H10g07426 | 10:11,325,651-11,329,983 | + | C1H10g11579 | CX10g007865 | LOC_Os10g22930 | Os10g0375400 | - | Detail |
| C2H10g27634 | 10:11,344,483-11,351,903 | + | C1H10g17100 | CX10g007853 | LOC_Os10g22950 | Os10g0375600 | SCT2 | Detail |
| C2H10g01808 | 10:11,353,585-11,357,066 | + | C1H10g28145 | CX10g009246 | LOC_Os10g22960 | Os10g0375700 | - | Detail |
| C2H10g12850 | 10:11,384,367-11,386,144 | + | C1H10g11843 | CX10g007643 | LOC_Os10g22980 | Os10g0376200 | - | Detail |
| C2H10g13141 | 10:11,387,177-11,387,695 | + | C1H10g01521 | CX10g007643 | LOC_Os10g22980 | Os10g0376200 | - | Detail |
| C2H10g21847 | 10:11,390,174-11,391,175 | + | C1H10g16390 | - | LOC_Os10g22990 | Os10g0376400 | - | Detail |
| C2H10g26374 | 10:11,412,719-11,414,762 | - | C1H3g19186 | CX10g008540 | LOC_Os12g26480 | Os12g0450500 | - | Detail |
| C2H10g01718 | 10:11,424,793-11,426,216 | + | C1H10g05833 | CX10g010017 | LOC_Os10g23050 | Os10g0376900 | - | Detail |
| C2H10g22235 | 10:11,430,899-11,431,336 | + | C1H10g04479 | - | LOC_Os10g23060 | Os10g0377000 | - | Detail |
| C2H10g00184 | 10:11,431,791-11,433,059 | + | C1H10g04479 | - | LOC_Os10g23060 | Os10g0377000 | - | Detail |
| C2H10g02772 | 10:11,433,093-11,433,994 | + | C1H10g22611 | - | - | - | - | Detail |
| C2H10g07202 | 10:11,439,650-11,439,994 | - | - | - | - | - | - | Detail |
| C2H10g03206 | 10:11,454,535-11,455,600 | + | C1H10g26560 | CX10g009805 | LOC_Os10g23090 | Os10g0377300 | - | Detail |
| C2H10g07959 | 10:11,460,909-11,465,153 | - | C1H10g17714 | CX10g007471 | LOC_Os10g23100 | Os10g0377400 | - | Detail |
| C2H10g10210 | 10:11,470,394-11,475,823 | - | C1H10g16242 | CX10g009710 | LOC_Os10g23120 | Os10g0377800 | - | Detail |
| C2H10g03538 | 10:11,479,749-11,484,621 | - | C1H10g26786 | CX10g007642 | LOC_Os10g23180 | Os10g0378000 | - | Detail |
| C2H10g14552 | 10:11,484,752-11,486,572 | - | C1H10g26786 | CX10g007642 | LOC_Os10g23160 | Os10g0378000 | - | Detail |
| C2H10g29877 | 10:11,492,667-11,502,037 | - | C1H10g26786 | CX10g007642 | LOC_Os10g23180 | Os10g0378100 | - | Detail |
| C2H10g28761 | 10:11,498,725-11,499,279 | + | C1H7g05031 | CX10g009446 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020249 | 2:22,903,487-22,905,145 | - | C1H2g02395 | C2H2g08455 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| CX2g022448 | 2:22,917,376-22,921,173 | - | C1H2g19871 | C2H2g09185 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| CX2g019193 | 2:22,935,762-22,944,334 | - | C1H2g18153 | C2H2g12073 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| CX2g022735 | 2:22,960,286-22,961,815 | + | C1H2g29661 | C2H2g17921 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| CX2g022878 | 2:22,962,472-22,971,021 | + | C1H2g22026 | C2H2g21511 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| CX2g020956 | 2:22,971,366-22,974,606 | - | C1H2g23006 | C2H2g09254 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| CX2g019377 | 2:22,975,537-22,983,875 | - | C1H2g02429 | C2H2g18815 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| CX2g023892 | 2:22,989,495-22,989,989 | + | - | - | - | Os02g0617800 | - | Detail |
| CX2g024793 | 2:22,990,933-22,991,987 | - | - | C2H2g18407 | - | - | - | Detail |
| CX2g024840 | 2:23,010,346-23,012,140 | + | C1H2g02238 | C2H2g04756 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| CX2g024264 | 2:23,013,988-23,016,187 | + | C1H2g04978 | C2H2g05107 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| CX2g019264 | 2:23,023,956-23,025,539 | - | C1H2g01139 | C2H2g01262 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| CX2g024894 | 2:23,040,566-23,042,067 | + | C1H2g19268 | C2H2g01838 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| CX2g019773 | 2:23,067,415-23,067,600 | + | - | - | - | - | - | Detail |
| CX2g023988 | 2:23,073,818-23,079,008 | - | C1H2g16057 | C2H2g02169 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| CX2g019895 | 2:23,097,006-23,100,304 | + | C1H2g31349 | C2H2g18142 | LOC_Os02g40680 | Os02g0620100 | - | Detail |
| CX2g020219 | 2:23,100,980-23,101,363 | + | C1H2g31349 | C2H2g10513 | LOC_Os02g40690 | Os02g0620200 | - | Detail |
| CX2g023588 | 2:23,106,411-23,106,847 | + | C1H2g24265 | C2H2g22522 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| CX2g024155 | 2:23,113,342-23,114,838 | + | C1H2g23096 | C2H2g07540 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| CX2g024932 | 2:23,120,861-23,122,351 | + | C1H2g17359 | C2H2g29061 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |