| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g00544 | 9:14,073,583-14,075,833 | + | C1H9g27006 | CX9g057956 | LOC_Os09g27620 | Os09g0449000 | OsMS1, PTC1 | Detail |
| C2H9g07425 | 9:14,112,330-14,115,612 | + | C1H9g01763 | CX9g054902 | LOC_Os09g27650 | Os09g0449400 | IDD13 | Detail |
| C2H9g06801 | 9:14,120,929-14,122,089 | + | C1H9g25929 | CX9g058036 | LOC_Os09g27660 | Os09g0449500 | - | Detail |
| C2H9g00964 | 9:14,124,597-14,127,998 | + | C1H9g24951 | CX9g055092 | LOC_Os09g27570 | Os09g0449600 | - | Detail |
| C2H9g26524 | 9:14,138,764-14,141,002 | + | C1H9g21509 | CX9g056221 | LOC_Os09g27680 | Os09g0449800 | - | Detail |
| C2H9g13669 | 9:14,145,121-14,146,572 | + | C1H9g08384 | CX9g058164 | LOC_Os09g27690 | Os09g0450200 | - | Detail |
| C2H9g25772 | 9:14,148,025-14,153,537 | - | C1H9g06430 | CX9g057479 | LOC_Os09g27700 | Os09g0450300 | - | Detail |
| C2H9g17119 | 9:14,168,109-14,169,320 | + | C1H9g22970 | CX9g057225 | LOC_Os09g27730 | Os09g0450600 | - | Detail |
| C2H9g24868 | 9:14,170,936-14,172,042 | - | C1H9g31330 | CX9g057122 | LOC_Os09g27750 | Os09g0451000 | ACO1, OsACO1, ACO | Detail |
| C2H9g13280 | 9:14,185,610-14,187,162 | + | C1H9g25747 | CX9g055115 | LOC_Os09g27820 | Os09g0451400 | ACO2, OsACO2 | Detail |
| C2H9g08067 | 9:14,192,051-14,196,963 | + | C1H9g11732 | CX9g057921 | LOC_Os09g27830 | Os09g0451500 | PDIL2;3 | Detail |
| C2H9g21782 | 9:14,214,240-14,218,489 | + | C1H9g05298 | CX9g054952 | LOC_Os09g27890 | Os09g0452200 | - | Detail |
| C2H9g02569 | 9:14,222,638-14,225,392 | + | - | - | LOC_Os09g27930 | Os09g0568400 | - | Detail |
| C2H9g03912 | 9:14,230,396-14,233,757 | - | C1H9g30352 | CX9g056293 | LOC_Os09g27950 | Os09g0452900 | - | Detail |
| C2H9g02612 | 9:14,236,882-14,239,760 | - | C1H9g28680 | CX9g056150 | LOC_Os09g27960 | Os09g0453000 | - | Detail |
| C2H9g04673 | 9:14,240,854-14,242,483 | + | C1H9g19635 | CX9g056673 | LOC_Os09g27980 | Os09g0453200 | - | Detail |
| C2H9g04521 | 9:14,242,771-14,244,153 | - | C1H9g20707 | CX9g056708 | LOC_Os09g27990 | Os09g0453300 | - | Detail |
| C2H9g02229 | 9:14,246,414-14,249,015 | - | C1H9g05527 | CX9g055145 | LOC_Os09g28000 | Os09g0453400 | - | Detail |
| C2H9g02526 | 9:14,252,080-14,256,551 | - | C1H9g19567 | CX9g057106 | LOC_Os09g28019 | Os09g0453500 | - | Detail |
| C2H9g18876 | 9:14,258,684-14,266,141 | - | C1H9g02119 | CX9g056994 | LOC_Os09g28040 | Os09g0453700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020249 | 2:22,903,487-22,905,145 | - | C1H2g02395 | C2H2g08455 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| CX2g022448 | 2:22,917,376-22,921,173 | - | C1H2g19871 | C2H2g09185 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| CX2g019193 | 2:22,935,762-22,944,334 | - | C1H2g18153 | C2H2g12073 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| CX2g022735 | 2:22,960,286-22,961,815 | + | C1H2g29661 | C2H2g17921 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| CX2g022878 | 2:22,962,472-22,971,021 | + | C1H2g22026 | C2H2g21511 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| CX2g020956 | 2:22,971,366-22,974,606 | - | C1H2g23006 | C2H2g09254 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| CX2g019377 | 2:22,975,537-22,983,875 | - | C1H2g02429 | C2H2g18815 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| CX2g023892 | 2:22,989,495-22,989,989 | + | - | - | - | Os02g0617800 | - | Detail |
| CX2g024793 | 2:22,990,933-22,991,987 | - | - | C2H2g18407 | - | - | - | Detail |
| CX2g024840 | 2:23,010,346-23,012,140 | + | C1H2g02238 | C2H2g04756 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| CX2g024264 | 2:23,013,988-23,016,187 | + | C1H2g04978 | C2H2g05107 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| CX2g019264 | 2:23,023,956-23,025,539 | - | C1H2g01139 | C2H2g01262 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| CX2g024894 | 2:23,040,566-23,042,067 | + | C1H2g19268 | C2H2g01838 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| CX2g019773 | 2:23,067,415-23,067,600 | + | - | - | - | - | - | Detail |
| CX2g023988 | 2:23,073,818-23,079,008 | - | C1H2g16057 | C2H2g02169 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| CX2g019895 | 2:23,097,006-23,100,304 | + | C1H2g31349 | C2H2g18142 | LOC_Os02g40680 | Os02g0620100 | - | Detail |
| CX2g020219 | 2:23,100,980-23,101,363 | + | C1H2g31349 | C2H2g10513 | LOC_Os02g40690 | Os02g0620200 | - | Detail |
| CX2g023588 | 2:23,106,411-23,106,847 | + | C1H2g24265 | C2H2g22522 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| CX2g024155 | 2:23,113,342-23,114,838 | + | C1H2g23096 | C2H2g07540 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| CX2g024932 | 2:23,120,861-23,122,351 | + | C1H2g17359 | C2H2g29061 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |