| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g18870 | 1:9,648,912-9,649,163 | - | C2H1g28326 | CX1g005114 | LOC_Os01g18970 | Os01g0294500 | - | Detail |
| C1H1g29635 | 1:9,655,973-9,657,505 | - | C2H1g09915 | CX1g006222 | LOC_Os01g19020 | Os01g0294700 | - | Detail |
| C1H1g12879 | 1:9,674,644-9,676,921 | - | C2H1g04732 | CX1g001907 | LOC_Os01g19120 | Os01g0295600 | - | Detail |
| C1H1g28529 | 1:9,677,949-9,679,033 | + | C2H1g18893 | - | - | - | - | Detail |
| C1H1g31498 | 1:9,679,928-9,682,495 | - | C2H1g02975 | CX1g007232 | LOC_Os01g19130 | Os01g0295700 | - | Detail |
| C1H1g10373 | 1:9,689,658-9,694,872 | - | C2H1g15168 | CX1g005315 | LOC_Os01g19160 | Os01g0296000 | - | Detail |
| C1H1g21926 | 1:9,695,092-9,699,626 | + | C2H1g21823 | CX1g002769 | LOC_Os01g19150 | Os01g0296100 | - | Detail |
| C1H1g30685 | 1:9,704,572-9,706,285 | + | C2H1g25050 | CX1g004527 | LOC_Os01g19170 | Os01g0296200 | PSL1 | Detail |
| C1H1g03525 | 1:9,733,757-9,736,856 | + | C2H1g08175 | CX1g006429 | LOC_Os01g19220 | Os01g0296700 | - | Detail |
| C1H1g07410 | 1:9,739,477-9,739,810 | + | C2H1g19176 | CX1g007175 | LOC_Os01g19240 | Os01g0296900 | - | Detail |
| C1H1g13299 | 1:9,742,220-9,743,789 | + | - | CX1g007175 | - | - | - | Detail |
| C1H1g03357 | 1:9,744,449-9,745,745 | + | C2H1g19176 | CX1g007175 | LOC_Os01g19240 | Os01g0297700 | - | Detail |
| C1H1g05646 | 1:9,780,119-9,783,030 | + | C2H1g08850 | CX1g004800 | LOC_Os01g19290 | Os01g0297700 | - | Detail |
| C1H1g23350 | 1:9,812,462-9,813,612 | - | C2H1g08916 | CX1g002108 | LOC_Os01g19370 | Os01g0299100 | - | Detail |
| C1H1g13589 | 1:9,815,814-9,817,828 | + | C2H1g18159 | CX1g004343 | LOC_Os01g19380 | Os01g0299200 | - | Detail |
| C1H1g12729 | 1:9,820,245-9,824,299 | - | C2H1g30139 | CX1g004126 | LOC_Os01g19390 | Os01g0299300 | - | Detail |
| C1H1g22162 | 1:9,827,540-9,829,915 | + | C2H1g27478 | CX1g006104 | LOC_Os01g19400 | Os01g0299400 | - | Detail |
| C1H1g29864 | 1:9,836,752-9,837,375 | - | C2H1g28481 | CX1g003386 | LOC_Os01g19430 | Os01g0299700 | - | Detail |
| C1H1g03197 | 1:9,838,048-9,838,729 | - | - | - | - | - | - | Detail |
| C1H1g22386 | 1:9,850,303-9,850,878 | + | - | CX1g004741 | LOC_Os01g19440 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020249 | 2:22,903,487-22,905,145 | - | C1H2g02395 | C2H2g08455 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| CX2g022448 | 2:22,917,376-22,921,173 | - | C1H2g19871 | C2H2g09185 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| CX2g019193 | 2:22,935,762-22,944,334 | - | C1H2g18153 | C2H2g12073 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| CX2g022735 | 2:22,960,286-22,961,815 | + | C1H2g29661 | C2H2g17921 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| CX2g022878 | 2:22,962,472-22,971,021 | + | C1H2g22026 | C2H2g21511 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| CX2g020956 | 2:22,971,366-22,974,606 | - | C1H2g23006 | C2H2g09254 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| CX2g019377 | 2:22,975,537-22,983,875 | - | C1H2g02429 | C2H2g18815 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| CX2g023892 | 2:22,989,495-22,989,989 | + | - | - | - | Os02g0617800 | - | Detail |
| CX2g024793 | 2:22,990,933-22,991,987 | - | - | C2H2g18407 | - | - | - | Detail |
| CX2g024840 | 2:23,010,346-23,012,140 | + | C1H2g02238 | C2H2g04756 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| CX2g024264 | 2:23,013,988-23,016,187 | + | C1H2g04978 | C2H2g05107 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| CX2g019264 | 2:23,023,956-23,025,539 | - | C1H2g01139 | C2H2g01262 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| CX2g024894 | 2:23,040,566-23,042,067 | + | C1H2g19268 | C2H2g01838 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| CX2g019773 | 2:23,067,415-23,067,600 | + | - | - | - | - | - | Detail |
| CX2g023988 | 2:23,073,818-23,079,008 | - | C1H2g16057 | C2H2g02169 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| CX2g019895 | 2:23,097,006-23,100,304 | + | C1H2g31349 | C2H2g18142 | LOC_Os02g40680 | Os02g0620100 | - | Detail |
| CX2g020219 | 2:23,100,980-23,101,363 | + | C1H2g31349 | C2H2g10513 | LOC_Os02g40690 | Os02g0620200 | - | Detail |
| CX2g023588 | 2:23,106,411-23,106,847 | + | C1H2g24265 | C2H2g22522 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| CX2g024155 | 2:23,113,342-23,114,838 | + | C1H2g23096 | C2H2g07540 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| CX2g024932 | 2:23,120,861-23,122,351 | + | C1H2g17359 | C2H2g29061 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |