| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08557 | 1:728,898-736,974 | - | C2H1g24458 | CX1g000582 | LOC_Os01g02760 | Os01g0117000 | - | Detail |
| C1H1g25607 | 1:732,662-736,132 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02770 | Os01g0117100 | - | Detail |
| C1H1g16172 | 1:740,462-741,538 | - | C2H1g24458 | CX1g004882 | LOC_Os01g02780 | Os01g0117200 | - | Detail |
| C1H1g21959 | 1:747,733-751,364 | + | C2H1g00354 | CX1g004864 | LOC_Os01g02790 | Os01g0117266 | - | Detail |
| C1H1g11145 | 1:755,141-759,474 | - | C2H1g01348 | CX1g004882 | LOC_Os01g02800 | Os01g0117400 | - | Detail |
| C1H1g14120 | 1:786,312-787,277 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02810 | Os01g0117500 | - | Detail |
| C1H1g24004 | 1:789,733-793,496 | - | C2H1g30217 | CX1g007103 | LOC_Os01g02860 | - | - | Detail |
| C1H1g14169 | 1:796,717-798,943 | + | C2H1g15563 | CX1g006137 | LOC_Os01g02870 | Os01g0117900 | - | Detail |
| C1H1g19036 | 1:802,243-805,758 | + | C2H1g29553 | CX1g006349 | LOC_Os01g02880 | Os01g0118000 | - | Detail |
| C1H1g31307 | 1:806,706-809,793 | + | - | - | - | Os01g0554150 | - | Detail |
| C1H1g29474 | 1:810,660-820,851 | + | C2H1g08229 | CX1g005801 | LOC_Os01g02884 | Os01g0118100 | - | Detail |
| C1H1g26055 | 1:835,901-842,476 | + | C2H1g02733 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C1H1g13587 | 1:846,726-849,632 | - | C2H1g25728 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C1H1g19340 | 1:863,703-867,080 | - | C2H1g24887 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C1H1g28376 | 1:872,069-874,831 | - | C2H1g16133 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C1H1g06299 | 1:878,642-881,826 | - | C2H1g28060 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C1H1g29708 | 1:890,429-894,356 | - | C2H1g09306 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C1H1g13986 | 1:900,511-901,032 | + | C2H1g08550 | - | - | - | - | Detail |
| C1H1g16487 | 1:903,386-903,544 | - | C2H2g06716 | CX2g022437 | LOC_Os10g02680 | Os10g0116300 | - | Detail |
| C1H1g01366 | 1:909,501-910,981 | - | C2H1g12790 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000395 | 1:10,961,479-10,961,763 | + | - | - | - | - | - | Detail |
| CX1g004968 | 1:11,017,227-11,017,568 | - | - | - | LOC_Os01g22380 | Os01g0327500 | - | Detail |
| CX1g002464 | 1:11,019,226-11,028,591 | - | C1H1g27960 | C2H1g23537 | LOC_Os01g22390 | Os01g0327600 | - | Detail |
| CX1g004469 | 1:11,039,389-11,040,672 | - | C1H1g31786 | C2H1g29147 | LOC_Os01g22430 | Os01g0327900 | - | Detail |
| CX1g002831 | 1:11,059,619-11,062,116 | - | C1H1g01439 | C2H1g18847 | LOC_Os01g22480 | Os01g0328300 | - | Detail |
| CX1g005736 | 1:11,071,305-11,073,272 | + | C1H1g31467 | C2H1g28322 | LOC_Os01g22500 | Os01g0328500 | - | Detail |
| CX1g002258 | 1:11,074,643-11,078,116 | + | C1H1g21789 | C2H1g27694 | LOC_Os01g22510 | Os01g0328600 | - | Detail |
| CX1g003140 | 1:11,079,123-11,082,214 | - | C1H1g28603 | C2H1g16889 | LOC_Os01g22520 | Os01g0328700 | - | Detail |
| CX1g006057 | 1:11,089,591-11,091,556 | - | C1H1g15186 | C2H1g17731 | LOC_Os01g22540 | Os01g0328300 | - | Detail |
| CX1g006158 | 1:11,092,468-11,092,737 | + | - | - | - | - | - | Detail |
| CX1g003742 | 1:11,094,617-11,100,919 | - | C1H1g04469 | C2H1g07485 | LOC_Os01g22550 | Os01g0328900 | - | Detail |
| CX1g001100 | 1:11,105,081-11,106,526 | + | C1H1g09374 | C2H1g12386 | - | Os01g0228200 | - | Detail |
| CX1g002787 | 1:11,113,564-11,114,145 | - | - | - | - | - | - | Detail |
| CX1g004704 | 1:11,119,985-11,120,284 | + | - | - | - | - | - | Detail |
| CX1g005773 | 1:11,121,490-11,123,545 | - | C1H1g05350 | C2H1g09100 | LOC_Os01g22560 | Os01g0329000 | - | Detail |
| CX1g001954 | 1:11,134,031-11,134,933 | - | C1H1g24035 | C2H1g09100 | LOC_Os01g22570 | Os01g0329000 | - | Detail |
| CX1g004739 | 1:11,136,649-11,136,933 | - | - | - | - | - | - | Detail |
| CX1g007075 | 1:11,154,810-11,154,992 | - | - | - | - | - | - | Detail |
| CX1g001596 | 1:11,156,389-11,158,964 | + | C1H1g22940 | C2H1g05958 | LOC_Os01g22590 | Os01g0329300 | - | Detail |
| CX1g000240 | 1:11,159,808-11,165,108 | - | C1H1g12319 | C2H1g26866 | LOC_Os01g22600 | Os01g0329400 | - | Detail |