| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16721 | 5:2,228,281-2,233,861 | - | C1H5g26722 | CX5g036804 | LOC_Os05g05280 | Os05g0145000 | PTB1 | Detail |
| C2H5g12450 | 5:2,240,864-2,243,982 | + | C1H5g13013 | CX5g037397 | LOC_Os05g05300 | Os05g0145300 | - | Detail |
| C2H5g08722 | 5:2,244,240-2,247,207 | - | C1H5g17300 | CX5g038713 | LOC_Os05g05310 | Os05g0145400 | OsVIL4 | Detail |
| C2H5g11049 | 5:2,249,545-2,255,668 | - | C1H5g19785 | CX5g038846 | LOC_Os05g05320 | Os05g0145600 | - | Detail |
| C2H5g14441 | 5:2,257,119-2,261,872 | - | C1H5g12398 | CX5g039530 | LOC_Os05g05330 | Os05g0145700 | - | Detail |
| C2H5g28800 | 5:2,266,854-2,273,888 | - | C1H5g10146 | CX5g036969 | LOC_Os05g05354 | Os05g0146100 | - | Detail |
| C2H5g07892 | 5:2,281,005-2,287,267 | - | C1H5g25798 | CX5g040919 | LOC_Os05g05440 | Os05g0147133 | - | Detail |
| C2H5g17748 | 5:2,287,734-2,292,107 | + | C1H5g22423 | CX5g040332 | LOC_Os05g05450 | Os05g0147200 | - | Detail |
| C2H5g04921 | 5:2,292,310-2,293,455 | - | C1H5g22301 | CX5g037149 | LOC_Os05g05460 | Os05g0147300 | - | Detail |
| C2H5g18351 | 5:2,294,060-2,298,703 | - | C1H5g03256 | CX5g037339 | LOC_Os05g05470 | Os05g0147400 | - | Detail |
| C2H5g29242 | 5:2,300,683-2,308,718 | + | C1H5g15984 | CX5g036816 | LOC_Os05g05480 | Os05g0147500 | - | Detail |
| C2H5g29270 | 5:2,318,769-2,332,334 | - | C1H5g00759 | CX5g037507 | LOC_Os05g05550 | Os05g0145700 | - | Detail |
| C2H5g24875 | 5:2,332,693-2,333,996 | + | C1H5g06824 | CX5g040568 | LOC_Os05g05560 | Os05g0148300 | - | Detail |
| C2H5g08617 | 5:2,336,885-2,344,960 | - | C1H5g04550 | CX5g040844 | LOC_Os05g05580 | Os05g0148500 | - | Detail |
| C2H5g16069 | 5:2,346,629-2,352,633 | - | C1H5g16478 | CX5g036905 | LOC_Os05g05590 | Os05g0148600 | OsNHX3 | Detail |
| C2H5g09761 | 5:2,355,682-2,360,957 | + | C1H5g12042 | CX5g038573 | LOC_Os05g05600 | Os05g0148700 | - | Detail |
| C2H5g00872 | 5:2,367,241-2,368,273 | + | C1H5g23031 | CX5g038518 | LOC_Os05g05620 | Os05g0148900 | - | Detail |
| C2H5g11195 | 5:2,374,645-2,382,211 | + | C1H5g20173 | CX5g038796 | LOC_Os05g05660 | Os05g0149200 | - | Detail |
| C2H5g03497 | 5:2,383,883-2,385,084 | - | C1H5g08164 | CX5g038120 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| C2H5g26975 | 5:2,389,432-2,390,635 | + | C1H5g08164 | CX5g040850 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019746 | 2:22,376,734-22,381,591 | - | C1H2g07169 | C2H2g21219 | LOC_Os02g39560 | Os02g0608500 | - | Detail |
| CX2g023427 | 2:22,387,174-22,391,224 | + | C1H2g27696 | C2H2g15416 | LOC_Os02g39570 | Os02g0608600 | - | Detail |
| CX2g024711 | 2:22,392,414-22,393,819 | + | C1H2g24103 | C2H2g09233 | LOC_Os02g39580 | Os02g0608700 | - | Detail |
| CX2g022288 | 2:22,394,405-22,395,418 | - | C1H2g09025 | C2H2g25183 | LOC_Os02g39590 | Os02g0608801 | - | Detail |
| CX2g022666 | 2:22,396,086-22,400,039 | - | C1H2g09645 | C2H2g23083 | LOC_Os02g39600 | Os02g0608900 | - | Detail |
| CX2g022931 | 2:22,401,874-22,402,149 | - | - | C2H2g27168 | - | Os02g0609000 | - | Detail |
| CX2g023597 | 2:22,407,873-22,408,418 | + | C1H2g17784 | C2H2g21957 | LOC_Os02g39620 | Os02g0609200 | - | Detail |
| CX2g020223 | 2:22,412,327-22,412,497 | + | - | - | - | - | - | Detail |
| CX2g021233 | 2:22,416,097-22,416,957 | + | - | - | - | - | - | Detail |
| CX2g020649 | 2:22,417,762-22,421,540 | + | C1H2g26038 | C2H2g00868 | LOC_Os02g39630 | Os02g0609400 | - | Detail |
| CX2g023796 | 2:22,422,426-22,422,674 | - | - | - | - | Os02g0609500 | - | Detail |
| CX2g018908 | 2:22,452,969-22,455,987 | - | C1H2g11633 | C2H2g11617 | LOC_Os02g39650 | Os02g0609800 | - | Detail |
| CX2g022992 | 2:22,461,467-22,462,984 | + | C1H2g12962 | C2H2g09655 | LOC_Os02g39660 | Os02g0609900 | - | Detail |
| CX2g024076 | 2:22,468,602-22,469,067 | - | C1H2g19689 | C2H2g15841 | - | - | - | Detail |
| CX2g022639 | 2:22,470,706-22,474,829 | - | C1H2g08707 | C2H2g06477 | LOC_Os02g39700 | Os02g0610400 | OsLa2 | Detail |
| CX2g019616 | 2:22,479,146-22,480,207 | + | C1H2g23212 | C2H2g27849 | LOC_Os02g39710 | Os02g0610500 | OsCOL4, OsD, OsBBX5, OsCOL4/OsD, OsCCT06 | Detail |
| CX2g023464 | 2:22,481,739-22,484,938 | - | C1H2g29771 | C2H2g05935 | LOC_Os02g39720 | Os02g0610600 | OsRSZ23 | Detail |
| CX2g019261 | 2:22,487,162-22,488,235 | - | C1H2g12677 | C2H2g27375 | LOC_Os02g39730 | Os02g0610700 | - | Detail |
| CX2g024465 | 2:22,489,730-22,491,690 | + | C1H2g25933 | C2H2g11424 | LOC_Os02g39740 | Os02g0610800 | - | Detail |
| CX2g023831 | 2:22,509,599-22,509,775 | - | - | - | - | Os07g0137500 | - | Detail |