| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01497 | 3:28,972,883-28,975,723 | - | C1H3g24709 | CX3g025964 | LOC_Os03g55640 | Os03g0765200 | - | Detail |
| C2H3g05267 | 3:28,982,740-28,986,255 | - | C1H3g19260 | CX3g030762 | LOC_Os03g55660 | Os03g0765400 | - | Detail |
| C2H3g21899 | 3:28,986,987-28,987,280 | - | C1H3g01103 | CX3g030135 | LOC_Os03g55670 | Os03g0765500 | - | Detail |
| C2H3g10178 | 3:28,987,334-28,988,943 | - | C1H3g21398 | CX3g030135 | LOC_Os03g55670 | - | - | Detail |
| C2H3g20680 | 3:28,990,039-28,991,037 | - | C1H3g25450 | CX3g030205 | LOC_Os03g55680 | Os03g0765500 | - | Detail |
| C2H3g07544 | 3:29,009,628-29,018,821 | - | C1H3g10434 | CX3g026492 | LOC_Os03g55734 | Os03g0766200 | - | Detail |
| C2H3g01139 | 3:29,028,646-29,033,920 | + | C1H3g28511 | CX3g026186 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| C2H3g02791 | 3:29,037,838-29,040,041 | + | C1H3g11551 | CX3g026597 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| C2H3g02036 | 3:29,052,567-29,055,644 | - | C1H3g16165 | CX3g026749 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| C2H3g17261 | 3:29,059,102-29,060,639 | + | C1H3g20103 | - | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| C2H3g25481 | 3:29,061,049-29,062,991 | + | C1H3g10730 | CX3g027804 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| C2H3g21501 | 3:29,065,629-29,068,055 | + | C1H3g31861 | CX3g028593 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| C2H3g01498 | 3:29,068,999-29,069,879 | + | C1H3g14127 | CX3g024946 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| C2H3g08266 | 3:29,077,859-29,082,044 | - | C1H3g26336 | CX3g028693 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| C2H3g19989 | 3:29,089,478-29,094,215 | - | C1H3g24628 | CX3g027389 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| C2H3g27533 | 3:29,095,145-29,096,650 | - | C1H3g25789 | CX3g028168 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| C2H3g12948 | 3:29,103,982-29,107,722 | + | C1H3g19145 | CX3g028504 | LOC_Os03g55950 | Os03g0769400 | - | Detail |
| C2H3g22257 | 3:29,110,512-29,113,327 | - | C1H3g25186 | CX3g028565 | LOC_Os03g55970 | Os03g0769600 | - | Detail |
| C2H3g01939 | 3:29,130,743-29,131,300 | + | C1H3g09664 | CX3g028075 | LOC_Os03g56010 | Os03g0770000 | - | Detail |
| C2H3g30222 | 3:29,133,381-29,138,555 | + | C1H3g17718 | CX3g030368 | LOC_Os03g56020 | Os03g0826400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019746 | 2:22,376,734-22,381,591 | - | C1H2g07169 | C2H2g21219 | LOC_Os02g39560 | Os02g0608500 | - | Detail |
| CX2g023427 | 2:22,387,174-22,391,224 | + | C1H2g27696 | C2H2g15416 | LOC_Os02g39570 | Os02g0608600 | - | Detail |
| CX2g024711 | 2:22,392,414-22,393,819 | + | C1H2g24103 | C2H2g09233 | LOC_Os02g39580 | Os02g0608700 | - | Detail |
| CX2g022288 | 2:22,394,405-22,395,418 | - | C1H2g09025 | C2H2g25183 | LOC_Os02g39590 | Os02g0608801 | - | Detail |
| CX2g022666 | 2:22,396,086-22,400,039 | - | C1H2g09645 | C2H2g23083 | LOC_Os02g39600 | Os02g0608900 | - | Detail |
| CX2g022931 | 2:22,401,874-22,402,149 | - | - | C2H2g27168 | - | Os02g0609000 | - | Detail |
| CX2g023597 | 2:22,407,873-22,408,418 | + | C1H2g17784 | C2H2g21957 | LOC_Os02g39620 | Os02g0609200 | - | Detail |
| CX2g020223 | 2:22,412,327-22,412,497 | + | - | - | - | - | - | Detail |
| CX2g021233 | 2:22,416,097-22,416,957 | + | - | - | - | - | - | Detail |
| CX2g020649 | 2:22,417,762-22,421,540 | + | C1H2g26038 | C2H2g00868 | LOC_Os02g39630 | Os02g0609400 | - | Detail |
| CX2g023796 | 2:22,422,426-22,422,674 | - | - | - | - | Os02g0609500 | - | Detail |
| CX2g018908 | 2:22,452,969-22,455,987 | - | C1H2g11633 | C2H2g11617 | LOC_Os02g39650 | Os02g0609800 | - | Detail |
| CX2g022992 | 2:22,461,467-22,462,984 | + | C1H2g12962 | C2H2g09655 | LOC_Os02g39660 | Os02g0609900 | - | Detail |
| CX2g024076 | 2:22,468,602-22,469,067 | - | C1H2g19689 | C2H2g15841 | - | - | - | Detail |
| CX2g022639 | 2:22,470,706-22,474,829 | - | C1H2g08707 | C2H2g06477 | LOC_Os02g39700 | Os02g0610400 | OsLa2 | Detail |
| CX2g019616 | 2:22,479,146-22,480,207 | + | C1H2g23212 | C2H2g27849 | LOC_Os02g39710 | Os02g0610500 | OsCOL4, OsD, OsBBX5, OsCOL4/OsD, OsCCT06 | Detail |
| CX2g023464 | 2:22,481,739-22,484,938 | - | C1H2g29771 | C2H2g05935 | LOC_Os02g39720 | Os02g0610600 | OsRSZ23 | Detail |
| CX2g019261 | 2:22,487,162-22,488,235 | - | C1H2g12677 | C2H2g27375 | LOC_Os02g39730 | Os02g0610700 | - | Detail |
| CX2g024465 | 2:22,489,730-22,491,690 | + | C1H2g25933 | C2H2g11424 | LOC_Os02g39740 | Os02g0610800 | - | Detail |
| CX2g023831 | 2:22,509,599-22,509,775 | - | - | - | - | Os07g0137500 | - | Detail |