| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24824 | 2:3,441,001-3,443,616 | - | C1H2g22189 | CX2g024836 | LOC_Os02g07670 | Os02g0173000 | - | Detail |
| C2H2g00550 | 2:3,446,779-3,453,230 | + | C1H2g28731 | CX2g022349 | LOC_Os02g07680 | Os02g0173100 | - | Detail |
| C2H2g04564 | 2:3,466,591-3,470,581 | + | C1H2g05749 | CX2g021850 | LOC_Os02g07720 | Os02g0173500 | - | Detail |
| C2H2g25488 | 2:3,473,477-3,474,885 | + | C1H2g20583 | CX2g022008 | LOC_Os02g07730 | Os02g0173600 | - | Detail |
| C2H2g25277 | 2:3,475,547-3,479,727 | + | C1H2g11719 | CX2g022408 | LOC_Os02g07740 | Os02g0173700 | - | Detail |
| C2H2g05358 | 2:3,479,779-3,483,687 | - | C1H2g13144 | CX2g019306 | LOC_Os02g07750 | Os02g0173800 | - | Detail |
| C2H2g15147 | 2:3,485,820-3,493,530 | + | C1H2g30476 | CX2g022443 | LOC_Os02g07760 | Os02g0173900 | - | Detail |
| C2H2g30059 | 2:3,499,284-3,501,532 | - | C1H2g17525 | CX2g021568 | LOC_Os02g07770 | Os02g0174000 | OsAPL | Detail |
| C2H2g18280 | 2:3,514,516-3,518,041 | + | C1H2g14780 | CX2g018842 | LOC_Os02g07780 | Os02g0174100 | - | Detail |
| C2H2g26229 | 2:3,519,233-3,522,261 | - | C1H2g19613 | CX2g023354 | LOC_Os02g07790 | Os02g0174200 | OsDPK2 | Detail |
| C2H2g20308 | 2:3,523,498-3,525,979 | + | C1H2g30350 | CX2g022416 | LOC_Os02g07800 | Os02g0174300 | - | Detail |
| C2H2g01221 | 2:3,526,704-3,529,643 | + | C1H2g08878 | CX2g024880 | LOC_Os02g07810 | Os02g0174400 | - | Detail |
| C2H2g00728 | 2:3,535,527-3,537,625 | + | C1H2g02250 | CX2g023598 | LOC_Os02g07820 | Os02g0174800 | - | Detail |
| C2H2g16638 | 2:3,540,178-3,543,174 | + | C1H2g14484 | CX2g023627 | LOC_Os02g07830 | Os02g0175000 | HKT6, OsHKT6, OsHKT1;3 | Detail |
| C2H2g09018 | 2:3,548,013-3,550,777 | + | C1H2g18593 | CX2g020712 | LOC_Os02g07840 | Os02g0175100 | RISBZ4 | Detail |
| C2H2g04831 | 2:3,551,235-3,554,184 | - | C1H2g09443 | CX2g023186 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| C2H2g15931 | 2:3,560,500-3,567,958 | + | C1H2g02033 | CX2g019528 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| C2H2g27332 | 2:3,569,517-3,574,214 | + | - | - | - | - | - | Detail |
| C2H2g23705 | 2:3,579,835-3,583,643 | - | C1H2g07080 | CX2g019494 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| C2H2g17525 | 2:3,584,868-3,586,687 | + | C1H2g29388 | CX2g023593 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019746 | 2:22,376,734-22,381,591 | - | C1H2g07169 | C2H2g21219 | LOC_Os02g39560 | Os02g0608500 | - | Detail |
| CX2g023427 | 2:22,387,174-22,391,224 | + | C1H2g27696 | C2H2g15416 | LOC_Os02g39570 | Os02g0608600 | - | Detail |
| CX2g024711 | 2:22,392,414-22,393,819 | + | C1H2g24103 | C2H2g09233 | LOC_Os02g39580 | Os02g0608700 | - | Detail |
| CX2g022288 | 2:22,394,405-22,395,418 | - | C1H2g09025 | C2H2g25183 | LOC_Os02g39590 | Os02g0608801 | - | Detail |
| CX2g022666 | 2:22,396,086-22,400,039 | - | C1H2g09645 | C2H2g23083 | LOC_Os02g39600 | Os02g0608900 | - | Detail |
| CX2g022931 | 2:22,401,874-22,402,149 | - | - | C2H2g27168 | - | Os02g0609000 | - | Detail |
| CX2g023597 | 2:22,407,873-22,408,418 | + | C1H2g17784 | C2H2g21957 | LOC_Os02g39620 | Os02g0609200 | - | Detail |
| CX2g020223 | 2:22,412,327-22,412,497 | + | - | - | - | - | - | Detail |
| CX2g021233 | 2:22,416,097-22,416,957 | + | - | - | - | - | - | Detail |
| CX2g020649 | 2:22,417,762-22,421,540 | + | C1H2g26038 | C2H2g00868 | LOC_Os02g39630 | Os02g0609400 | - | Detail |
| CX2g023796 | 2:22,422,426-22,422,674 | - | - | - | - | Os02g0609500 | - | Detail |
| CX2g018908 | 2:22,452,969-22,455,987 | - | C1H2g11633 | C2H2g11617 | LOC_Os02g39650 | Os02g0609800 | - | Detail |
| CX2g022992 | 2:22,461,467-22,462,984 | + | C1H2g12962 | C2H2g09655 | LOC_Os02g39660 | Os02g0609900 | - | Detail |
| CX2g024076 | 2:22,468,602-22,469,067 | - | C1H2g19689 | C2H2g15841 | - | - | - | Detail |
| CX2g022639 | 2:22,470,706-22,474,829 | - | C1H2g08707 | C2H2g06477 | LOC_Os02g39700 | Os02g0610400 | OsLa2 | Detail |
| CX2g019616 | 2:22,479,146-22,480,207 | + | C1H2g23212 | C2H2g27849 | LOC_Os02g39710 | Os02g0610500 | OsCOL4, OsD, OsBBX5, OsCOL4/OsD, OsCCT06 | Detail |
| CX2g023464 | 2:22,481,739-22,484,938 | - | C1H2g29771 | C2H2g05935 | LOC_Os02g39720 | Os02g0610600 | OsRSZ23 | Detail |
| CX2g019261 | 2:22,487,162-22,488,235 | - | C1H2g12677 | C2H2g27375 | LOC_Os02g39730 | Os02g0610700 | - | Detail |
| CX2g024465 | 2:22,489,730-22,491,690 | + | C1H2g25933 | C2H2g11424 | LOC_Os02g39740 | Os02g0610800 | - | Detail |
| CX2g023831 | 2:22,509,599-22,509,775 | - | - | - | - | Os07g0137500 | - | Detail |