| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g22523 | 7:14,977,475-14,978,158 | + | - | CX7g046418 | LOC_Os07g31020 | Os07g0239200 | - | Detail |
| C2H7g25392 | 7:14,994,159-14,994,983 | + | C1H7g12460 | CX7g046033 | LOC_Os07g31070 | Os07g0492966 | - | Detail |
| C2H7g13319 | 7:14,998,194-15,002,179 | - | - | - | - | - | - | Detail |
| C2H7g19905 | 7:15,000,882-15,002,898 | + | C1H7g12460 | CX7g050031 | LOC_Os07g31070 | Os07g0492966 | - | Detail |
| C2H7g24394 | 7:15,014,729-15,016,594 | + | C1H7g15473 | CX7g046090 | LOC_Os07g31210 | Os07g0494300 | - | Detail |
| C2H7g05820 | 7:15,017,099-15,019,410 | + | C1H7g25298 | CX7g050175 | LOC_Os07g31210 | Os07g0494800 | - | Detail |
| C2H7g01623 | 7:15,020,070-15,020,474 | + | C1H7g10521 | - | - | - | - | Detail |
| C2H7g23891 | 7:15,021,216-15,025,219 | + | C1H7g25298 | CX7g050175 | LOC_Os07g31250 | Os07g0494800 | - | Detail |
| C2H7g16210 | 7:15,026,749-15,030,453 | - | C1H7g13984 | - | LOC_Os07g31260 | Os07g0494900 | - | Detail |
| C2H7g06678 | 7:15,033,570-15,037,273 | + | C1H7g09745 | CX7g050370 | LOC_Os07g31270 | Os07g0495000 | - | Detail |
| C2H7g12169 | 7:15,039,148-15,040,571 | + | - | - | - | - | - | Detail |
| C2H7g14911 | 7:15,043,182-15,045,495 | + | C1H7g02274 | CX7g046113 | LOC_Os07g31280 | Os07g0495100 | CK2beta3 | Detail |
| C2H7g21816 | 7:15,046,164-15,047,902 | + | C1H7g11297 | CX7g046113 | LOC_Os07g31280 | Os07g0495100 | CK2beta3 | Detail |
| C2H7g25162 | 7:15,053,361-15,056,525 | + | C1H7g22433 | CX7g046153 | LOC_Os07g31290 | Os07g0495150 | - | Detail |
| C2H7g10499 | 7:15,057,599-15,060,170 | - | C1H7g08846 | - | LOC_Os07g31300 | Os07g0495200 | - | Detail |
| C2H7g00645 | 7:15,064,716-15,067,154 | - | C1H7g15686 | CX7g049890 | LOC_Os07g31310 | Os07g0495300 | - | Detail |
| C2H7g18053 | 7:15,067,719-15,068,048 | - | C1H7g15686 | - | LOC_Os07g31310 | Os07g0495300 | - | Detail |
| C2H7g13842 | 7:15,073,358-15,083,477 | + | C1H7g31277 | CX7g047105 | LOC_Os07g31340 | Os07g0495900 | - | Detail |
| C2H7g19386 | 7:15,087,908-15,091,857 | - | C1H7g01583 | CX7g046030 | LOC_Os07g31370 | Os07g0496000 | - | Detail |
| C2H7g26295 | 7:15,097,081-15,105,695 | + | C1H7g11451 | CX7g047287 | LOC_Os07g31380 | Os07g0496200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019746 | 2:22,376,734-22,381,591 | - | C1H2g07169 | C2H2g21219 | LOC_Os02g39560 | Os02g0608500 | - | Detail |
| CX2g023427 | 2:22,387,174-22,391,224 | + | C1H2g27696 | C2H2g15416 | LOC_Os02g39570 | Os02g0608600 | - | Detail |
| CX2g024711 | 2:22,392,414-22,393,819 | + | C1H2g24103 | C2H2g09233 | LOC_Os02g39580 | Os02g0608700 | - | Detail |
| CX2g022288 | 2:22,394,405-22,395,418 | - | C1H2g09025 | C2H2g25183 | LOC_Os02g39590 | Os02g0608801 | - | Detail |
| CX2g022666 | 2:22,396,086-22,400,039 | - | C1H2g09645 | C2H2g23083 | LOC_Os02g39600 | Os02g0608900 | - | Detail |
| CX2g022931 | 2:22,401,874-22,402,149 | - | - | C2H2g27168 | - | Os02g0609000 | - | Detail |
| CX2g023597 | 2:22,407,873-22,408,418 | + | C1H2g17784 | C2H2g21957 | LOC_Os02g39620 | Os02g0609200 | - | Detail |
| CX2g020223 | 2:22,412,327-22,412,497 | + | - | - | - | - | - | Detail |
| CX2g021233 | 2:22,416,097-22,416,957 | + | - | - | - | - | - | Detail |
| CX2g020649 | 2:22,417,762-22,421,540 | + | C1H2g26038 | C2H2g00868 | LOC_Os02g39630 | Os02g0609400 | - | Detail |
| CX2g023796 | 2:22,422,426-22,422,674 | - | - | - | - | Os02g0609500 | - | Detail |
| CX2g018908 | 2:22,452,969-22,455,987 | - | C1H2g11633 | C2H2g11617 | LOC_Os02g39650 | Os02g0609800 | - | Detail |
| CX2g022992 | 2:22,461,467-22,462,984 | + | C1H2g12962 | C2H2g09655 | LOC_Os02g39660 | Os02g0609900 | - | Detail |
| CX2g024076 | 2:22,468,602-22,469,067 | - | C1H2g19689 | C2H2g15841 | - | - | - | Detail |
| CX2g022639 | 2:22,470,706-22,474,829 | - | C1H2g08707 | C2H2g06477 | LOC_Os02g39700 | Os02g0610400 | OsLa2 | Detail |
| CX2g019616 | 2:22,479,146-22,480,207 | + | C1H2g23212 | C2H2g27849 | LOC_Os02g39710 | Os02g0610500 | OsCOL4, OsD, OsBBX5, OsCOL4/OsD, OsCCT06 | Detail |
| CX2g023464 | 2:22,481,739-22,484,938 | - | C1H2g29771 | C2H2g05935 | LOC_Os02g39720 | Os02g0610600 | OsRSZ23 | Detail |
| CX2g019261 | 2:22,487,162-22,488,235 | - | C1H2g12677 | C2H2g27375 | LOC_Os02g39730 | Os02g0610700 | - | Detail |
| CX2g024465 | 2:22,489,730-22,491,690 | + | C1H2g25933 | C2H2g11424 | LOC_Os02g39740 | Os02g0610800 | - | Detail |
| CX2g023831 | 2:22,509,599-22,509,775 | - | - | - | - | Os07g0137500 | - | Detail |