| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11372 | 6:5,106,515-5,112,265 | - | C2H6g18048 | CX6g045112 | LOC_Os06g11320 | Os06g0216800 | - | Detail |
| C1H6g00888 | 6:5,124,141-5,138,951 | - | C2H6g03789 | CX6g041344 | LOC_Os06g11330 | Os06g0217300 | OsMADS55 | Detail |
| C1H6g18685 | 6:5,152,665-5,155,682 | - | C2H6g23128 | CX6g045941 | LOC_Os06g11370 | Os06g0217500 | - | Detail |
| C1H6g24377 | 6:5,158,502-5,174,889 | - | C2H6g26845 | CX6g045380 | LOC_Os06g11380 | Os06g0217600 | - | Detail |
| C1H6g12848 | 6:5,180,504-5,182,693 | - | C2H6g14795 | CX6g044036 | LOC_Os06g11400 | Os06g0217700 | - | Detail |
| C1H6g13809 | 6:5,194,754-5,196,441 | + | C2H6g01224 | CX6g045086 | LOC_Os06g11410 | Os06g0217900 | - | Detail |
| C1H6g21444 | 6:5,207,673-5,210,294 | + | C2H6g05678 | CX6g042909 | LOC_Os06g11430 | Os06g0218100 | - | Detail |
| C1H6g24569 | 6:5,212,059-5,218,518 | - | C2H6g22208 | CX6g042409 | LOC_Os06g11440 | Os06g0116800 | - | Detail |
| C1H6g18324 | 6:5,219,309-5,221,083 | - | - | - | - | Os06g0218150 | - | Detail |
| C1H6g03515 | 6:5,244,616-5,245,596 | + | C2H6g20176 | CX6g045174 | LOC_Os06g11490 | Os06g0218600 | - | Detail |
| C1H6g30313 | 6:5,246,901-5,255,390 | - | C2H6g07612 | CX6g044207 | LOC_Os06g11500 | Os06g0218500 | - | Detail |
| C1H6g10650 | 6:5,261,285-5,268,909 | - | C2H6g07126 | CX6g044149 | LOC_Os06g11520 | Os06g0218900 | - | Detail |
| C1H6g08240 | 6:5,277,297-5,281,555 | + | C2H6g01223 | CX6g043370 | LOC_Os06g11600 | Os06g0219400 | - | Detail |
| C1H6g20600 | 6:5,282,736-5,283,610 | - | C2H6g05696 | CX6g045423 | LOC_Os06g11610 | Os06g0219500 | - | Detail |
| C1H6g16726 | 6:5,284,360-5,284,792 | - | C2H6g05696 | - | - | - | - | Detail |
| C1H6g25178 | 6:5,287,114-5,290,789 | + | C2H6g19113 | CX6g043205 | LOC_Os06g11620 | Os06g0219600 | - | Detail |
| C1H6g15697 | 6:5,291,704-5,294,095 | - | C2H6g28746 | CX6g042726 | LOC_Os06g11630 | Os06g0219700 | - | Detail |
| C1H6g18914 | 6:5,303,979-5,309,020 | - | C2H6g03151 | CX6g045973 | LOC_Os06g11640 | Os06g0219800 | - | Detail |
| C1H6g08532 | 6:5,340,533-5,341,081 | + | C2H6g24300 | CX6g045266 | LOC_Os06g11720 | Os06g0220500 | - | Detail |
| C1H6g03579 | 6:5,341,180-5,342,130 | + | C2H6g24300 | CX6g045266 | LOC_Os06g11720 | Os06g0220500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019746 | 2:22,376,734-22,381,591 | - | C1H2g07169 | C2H2g21219 | LOC_Os02g39560 | Os02g0608500 | - | Detail |
| CX2g023427 | 2:22,387,174-22,391,224 | + | C1H2g27696 | C2H2g15416 | LOC_Os02g39570 | Os02g0608600 | - | Detail |
| CX2g024711 | 2:22,392,414-22,393,819 | + | C1H2g24103 | C2H2g09233 | LOC_Os02g39580 | Os02g0608700 | - | Detail |
| CX2g022288 | 2:22,394,405-22,395,418 | - | C1H2g09025 | C2H2g25183 | LOC_Os02g39590 | Os02g0608801 | - | Detail |
| CX2g022666 | 2:22,396,086-22,400,039 | - | C1H2g09645 | C2H2g23083 | LOC_Os02g39600 | Os02g0608900 | - | Detail |
| CX2g022931 | 2:22,401,874-22,402,149 | - | - | C2H2g27168 | - | Os02g0609000 | - | Detail |
| CX2g023597 | 2:22,407,873-22,408,418 | + | C1H2g17784 | C2H2g21957 | LOC_Os02g39620 | Os02g0609200 | - | Detail |
| CX2g020223 | 2:22,412,327-22,412,497 | + | - | - | - | - | - | Detail |
| CX2g021233 | 2:22,416,097-22,416,957 | + | - | - | - | - | - | Detail |
| CX2g020649 | 2:22,417,762-22,421,540 | + | C1H2g26038 | C2H2g00868 | LOC_Os02g39630 | Os02g0609400 | - | Detail |
| CX2g023796 | 2:22,422,426-22,422,674 | - | - | - | - | Os02g0609500 | - | Detail |
| CX2g018908 | 2:22,452,969-22,455,987 | - | C1H2g11633 | C2H2g11617 | LOC_Os02g39650 | Os02g0609800 | - | Detail |
| CX2g022992 | 2:22,461,467-22,462,984 | + | C1H2g12962 | C2H2g09655 | LOC_Os02g39660 | Os02g0609900 | - | Detail |
| CX2g024076 | 2:22,468,602-22,469,067 | - | C1H2g19689 | C2H2g15841 | - | - | - | Detail |
| CX2g022639 | 2:22,470,706-22,474,829 | - | C1H2g08707 | C2H2g06477 | LOC_Os02g39700 | Os02g0610400 | OsLa2 | Detail |
| CX2g019616 | 2:22,479,146-22,480,207 | + | C1H2g23212 | C2H2g27849 | LOC_Os02g39710 | Os02g0610500 | OsCOL4, OsD, OsBBX5, OsCOL4/OsD, OsCCT06 | Detail |
| CX2g023464 | 2:22,481,739-22,484,938 | - | C1H2g29771 | C2H2g05935 | LOC_Os02g39720 | Os02g0610600 | OsRSZ23 | Detail |
| CX2g019261 | 2:22,487,162-22,488,235 | - | C1H2g12677 | C2H2g27375 | LOC_Os02g39730 | Os02g0610700 | - | Detail |
| CX2g024465 | 2:22,489,730-22,491,690 | + | C1H2g25933 | C2H2g11424 | LOC_Os02g39740 | Os02g0610800 | - | Detail |
| CX2g023831 | 2:22,509,599-22,509,775 | - | - | - | - | Os07g0137500 | - | Detail |