| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g13871 | 5:11,639,460-11,639,925 | + | C1H11g14205 | CX5g038030 | LOC_Os11g43404 | Os11g0655000 | - | Detail |
| C2H5g21577 | 5:11,643,640-11,649,858 | + | C1H5g25266 | CX5g040201 | LOC_Os05g24010 | Os05g0305900 | - | Detail |
| C2H5g20371 | 5:11,650,849-11,659,488 | - | C1H5g23435 | CX5g037665 | LOC_Os05g24020 | Os05g0306000 | - | Detail |
| C2H5g03713 | 5:11,668,154-11,669,404 | + | C1H5g14640 | CX5g039110 | LOC_Os05g24080 | Os05g0345900 | - | Detail |
| C2H5g05702 | 5:11,708,643-11,718,091 | + | C1H5g22935 | CX5g037031 | LOC_Os05g24140 | Os05g0307100 | - | Detail |
| C2H5g28956 | 5:11,718,182-11,721,860 | - | C1H5g07106 | CX5g037443 | LOC_Os05g24150 | Os05g0307200 | - | Detail |
| C2H5g02521 | 5:11,729,270-11,730,170 | - | C1H5g26016 | CX5g040600 | LOC_Os05g24160 | Os05g0307400 | OsDRB1-1 | Detail |
| C2H5g01593 | 5:11,731,738-11,735,617 | - | C1H5g26016 | CX5g040600 | LOC_Os05g24160 | Os05g0307400 | OsDRB1-1 | Detail |
| C2H5g00614 | 5:11,841,271-11,845,455 | + | C1H5g02736 | CX5g037332 | LOC_Os05g24550 | Os05g0310500 | - | Detail |
| C2H5g17111 | 5:11,845,944-11,847,773 | - | C1H5g04494 | CX5g037484 | LOC_Os05g24560 | Os05g0310600 | - | Detail |
| C2H5g23044 | 5:11,855,834-11,862,127 | + | C1H5g26249 | CX5g040547 | LOC_Os05g24580 | Os05g0310750 | - | Detail |
| C2H5g15821 | 5:11,865,225-11,870,144 | + | C1H5g13473 | CX5g037996 | LOC_Os05g24601 | Os05g0310800 | - | Detail |
| C2H5g25624 | 5:11,875,228-11,880,506 | + | C1H5g24769 | CX5g037996 | LOC_Os05g24601 | Os05g0311000 | - | Detail |
| C2H5g14462 | 5:11,912,047-11,915,088 | - | C1H6g07359 | - | - | - | - | Detail |
| C2H5g00350 | 5:11,921,053-11,921,813 | + | C1H5g28483 | CX5g037701 | LOC_Os05g24650 | Os05g0311500 | - | Detail |
| C2H5g01545 | 5:11,952,289-11,965,485 | - | C1H5g19973 | CX5g040887 | LOC_Os05g24684 | Os05g0312000 | SPL40 | Detail |
| C2H5g12302 | 5:11,987,285-11,989,823 | - | C1H5g11619 | CX5g037289 | LOC_Os05g24770 | Os05g0312500 | - | Detail |
| C2H5g00579 | 5:12,010,961-12,017,013 | + | C1H5g25693 | CX5g039271 | LOC_Os05g24880 | Os05g0313500 | - | Detail |
| C2H5g27404 | 5:12,020,465-12,022,339 | - | C1H5g19700 | CX5g038570 | LOC_Os05g24900 | Os05g0313700 | - | Detail |
| C2H5g09680 | 5:12,027,007-12,031,685 | - | C1H5g14342 | CX5g038966 | LOC_Os05g24930 | Os05g0583950 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023488 | 2:21,731,401-21,734,452 | - | C1H2g03331 | C2H2g27568 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| CX2g022047 | 2:21,735,753-21,736,536 | - | C1H2g17655 | C2H4g03036 | - | - | - | Detail |
| CX2g020733 | 2:21,739,623-21,741,823 | - | C1H2g12247 | C2H2g08333 | LOC_Os02g38140 | Os02g0594900 | - | Detail |
| CX2g024257 | 2:21,752,774-21,755,388 | - | C1H2g09203 | C2H2g24282 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| CX2g021248 | 2:21,766,374-21,766,898 | + | - | - | LOC_Os02g38170 | Os02g0595200 | - | Detail |
| CX2g021227 | 2:21,770,317-21,771,217 | - | C1H2g18043 | C2H2g12684 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| CX2g019326 | 2:21,774,066-21,774,674 | - | - | - | LOC_Os02g38190 | Os02g0595400 | - | Detail |
| CX2g023998 | 2:21,775,541-21,779,005 | - | C1H2g28766 | C2H2g27779 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| CX2g024107 | 2:21,780,786-21,782,189 | + | C1H2g02203 | C2H2g10443 | LOC_Os02g38210 | Os02g0595700 | - | Detail |
| CX2g023123 | 2:21,785,069-21,788,696 | + | C1H2g15529 | C2H2g13918 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| CX2g024625 | 2:21,789,900-21,791,586 | - | C1H2g13753 | C2H2g12990 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| CX2g021096 | 2:21,796,006-21,798,684 | - | C1H2g12816 | C2H2g05640 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| CX2g020732 | 2:21,801,175-21,809,807 | - | C1H2g21293 | C2H2g05424 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| CX2g020902 | 2:21,811,441-21,813,307 | + | C1H2g16769 | C2H2g17152 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| CX2g024363 | 2:21,816,225-21,817,425 | - | C1H2g00956 | C2H2g06504 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| CX2g024642 | 2:21,822,066-21,825,233 | - | C1H2g15841 | C2H2g22627 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| CX2g023192 | 2:21,831,735-21,833,795 | + | C1H2g27617 | C2H2g10630 | LOC_Os02g38320 | Os02g0596700 | - | Detail |
| CX2g022944 | 2:21,834,984-21,835,362 | - | C1H2g26547 | C2H2g00192 | LOC_Os02g38330 | - | - | Detail |
| CX2g023966 | 2:21,837,165-21,841,003 | + | C1H2g07087 | C2H2g14667 | LOC_Os02g38340 | Os02g0596900 | - | Detail |
| CX2g022445 | 2:21,842,185-21,844,156 | - | C1H2g18301 | C2H2g08738 | LOC_Os02g38350 | Os02g0597000 | - | Detail |