| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15484 | 5:7,890,974-7,891,445 | + | C1H5g13165 | CX5g039636 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C2H5g22806 | 5:7,895,671-7,896,880 | + | C1H5g15820 | CX5g039636 | LOC_Os05g16430 | Os05g0258400 | - | Detail |
| C2H5g01726 | 5:7,941,836-7,945,464 | + | C1H5g26412 | CX5g040627 | LOC_Os05g16630 | Os05g0255600 | - | Detail |
| C2H5g24880 | 5:7,948,695-7,953,664 | + | C1H5g13724 | CX5g040616 | LOC_Os05g16640 | Os05g0255800 | - | Detail |
| C2H5g00655 | 5:7,958,651-7,964,493 | + | C1H5g15674 | CX5g039252 | LOC_Os05g16660 | Os05g0256000 | - | Detail |
| C2H5g00991 | 5:7,977,231-7,988,242 | + | C1H5g11784 | CX5g038401 | LOC_Os05g16670 | Os05g0256100 | - | Detail |
| C2H5g02628 | 5:8,033,195-8,043,634 | + | C1H5g15820 | CX5g040531 | LOC_Os05g16740 | Os05g0256500 | - | Detail |
| C2H5g15704 | 5:8,067,845-8,077,489 | + | C1H5g24182 | CX5g039056 | LOC_Os05g16824 | Os05g0257100 | - | Detail |
| C2H5g05784 | 5:8,082,123-8,082,681 | + | C1H5g28432 | CX3g030223 | - | - | - | Detail |
| C2H5g10404 | 5:8,098,939-8,099,751 | + | C1H5g13165 | CX5g036934 | LOC_Os05g16920 | Os05g0258400 | - | Detail |
| C2H5g09148 | 5:8,104,215-8,111,032 | + | C1H5g16401 | CX5g040223 | LOC_Os05g16930 | Os05g0258400 | - | Detail |
| C2H5g27501 | 5:8,138,685-8,139,056 | + | - | - | - | - | - | Detail |
| C2H5g12556 | 5:8,141,799-8,148,188 | + | C1H5g26063 | CX5g036934 | LOC_Os05g16420 | Os05g0263100 | - | Detail |
| C2H5g10804 | 5:8,170,876-8,171,133 | - | - | CX5g039686 | - | - | - | Detail |
| C2H5g26769 | 5:8,171,944-8,172,648 | + | - | - | - | - | - | Detail |
| C2H5g13404 | 5:8,177,378-8,182,945 | + | C1H5g31408 | CX5g038227 | LOC_Os05g16740 | Os05g0170300 | OsSGN3b | Detail |
| C2H5g07983 | 5:8,218,477-8,220,120 | + | C1H5g04336 | CX5g036934 | LOC_Os05g16420 | Os05g0263100 | - | Detail |
| C2H5g10995 | 5:8,225,710-8,232,617 | + | C1H5g15820 | CX5g036934 | LOC_Os05g16740 | Os05g0265500 | - | Detail |
| C2H5g15153 | 5:8,231,556-8,241,392 | - | - | CX5g038474 | LOC_Os05g16340 | - | - | Detail |
| C2H5g15568 | 5:8,238,240-8,242,797 | + | C1H5g11784 | CX5g040273 | LOC_Os05g17810 | Os05g0263100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023488 | 2:21,731,401-21,734,452 | - | C1H2g03331 | C2H2g27568 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| CX2g022047 | 2:21,735,753-21,736,536 | - | C1H2g17655 | C2H4g03036 | - | - | - | Detail |
| CX2g020733 | 2:21,739,623-21,741,823 | - | C1H2g12247 | C2H2g08333 | LOC_Os02g38140 | Os02g0594900 | - | Detail |
| CX2g024257 | 2:21,752,774-21,755,388 | - | C1H2g09203 | C2H2g24282 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| CX2g021248 | 2:21,766,374-21,766,898 | + | - | - | LOC_Os02g38170 | Os02g0595200 | - | Detail |
| CX2g021227 | 2:21,770,317-21,771,217 | - | C1H2g18043 | C2H2g12684 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| CX2g019326 | 2:21,774,066-21,774,674 | - | - | - | LOC_Os02g38190 | Os02g0595400 | - | Detail |
| CX2g023998 | 2:21,775,541-21,779,005 | - | C1H2g28766 | C2H2g27779 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| CX2g024107 | 2:21,780,786-21,782,189 | + | C1H2g02203 | C2H2g10443 | LOC_Os02g38210 | Os02g0595700 | - | Detail |
| CX2g023123 | 2:21,785,069-21,788,696 | + | C1H2g15529 | C2H2g13918 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| CX2g024625 | 2:21,789,900-21,791,586 | - | C1H2g13753 | C2H2g12990 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| CX2g021096 | 2:21,796,006-21,798,684 | - | C1H2g12816 | C2H2g05640 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| CX2g020732 | 2:21,801,175-21,809,807 | - | C1H2g21293 | C2H2g05424 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| CX2g020902 | 2:21,811,441-21,813,307 | + | C1H2g16769 | C2H2g17152 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| CX2g024363 | 2:21,816,225-21,817,425 | - | C1H2g00956 | C2H2g06504 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| CX2g024642 | 2:21,822,066-21,825,233 | - | C1H2g15841 | C2H2g22627 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| CX2g023192 | 2:21,831,735-21,833,795 | + | C1H2g27617 | C2H2g10630 | LOC_Os02g38320 | Os02g0596700 | - | Detail |
| CX2g022944 | 2:21,834,984-21,835,362 | - | C1H2g26547 | C2H2g00192 | LOC_Os02g38330 | - | - | Detail |
| CX2g023966 | 2:21,837,165-21,841,003 | + | C1H2g07087 | C2H2g14667 | LOC_Os02g38340 | Os02g0596900 | - | Detail |
| CX2g022445 | 2:21,842,185-21,844,156 | - | C1H2g18301 | C2H2g08738 | LOC_Os02g38350 | Os02g0597000 | - | Detail |