| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10155 | 1:3,235,752-3,239,909 | - | C2H1g23784 | CX1g001907 | LOC_Os01g07700 | Os01g0171800 | - | Detail |
| C1H1g26958 | 1:3,243,405-3,246,785 | + | C2H1g20738 | CX1g002415 | LOC_Os01g07710 | - | - | Detail |
| C1H1g20095 | 1:3,246,360-3,250,029 | - | C2H1g20386 | CX1g006763 | LOC_Os01g07720 | Os01g0172000 | - | Detail |
| C1H1g10981 | 1:3,252,323-3,254,633 | + | C2H1g03942 | CX1g003588 | LOC_Os01g07730 | Os01g0172100 | - | Detail |
| C1H1g04902 | 1:3,254,723-3,259,499 | - | C2H1g18220 | CX1g004788 | LOC_Os01g07740 | Os01g0172200 | OsDB10 | Detail |
| C1H1g23634 | 1:3,260,816-3,263,868 | - | C2H1g18869 | CX1g001295 | LOC_Os01g07750 | Os01g0172300 | - | Detail |
| C1H1g21846 | 1:3,264,902-3,269,142 | - | C2H1g28778 | CX1g001900 | LOC_Os01g07760 | Os01g0172400 | - | Detail |
| C1H1g19012 | 1:3,271,684-3,273,520 | + | C2H1g21544 | CX1g005114 | LOC_Os01g07770 | Os01g0172600 | - | Detail |
| C1H1g10453 | 1:3,275,994-3,276,566 | + | C2H1g20728 | CX1g002646 | LOC_Os01g07780 | Os01g0172800 | - | Detail |
| C1H1g07102 | 1:3,277,768-3,280,638 | + | C2H1g22521 | CX1g000708 | LOC_Os01g07790 | Os01g0172900 | - | Detail |
| C1H1g22748 | 1:3,280,796-3,282,208 | - | C2H1g05856 | CX1g005561 | LOC_Os01g07800 | Os01g0173000 | - | Detail |
| C1H1g06548 | 1:3,282,970-3,284,387 | - | C2H1g12136 | CX1g002508 | LOC_Os01g07810 | Os01g0173100 | - | Detail |
| C1H1g18797 | 1:3,296,955-3,298,669 | + | C2H1g26590 | CX1g005870 | LOC_Os01g07850 | Os01g0173600 | - | Detail |
| C1H1g19078 | 1:3,315,371-3,321,084 | + | C2H1g11564 | CX1g003910 | LOC_Os01g07870 | Os01g0173900 | - | Detail |
| C1H1g28967 | 1:3,322,095-3,322,924 | - | C2H1g09395 | CX1g004606 | LOC_Os01g07880 | Os01g0174000 | OsHY5L3, OsbZIP01, OsRE1 | Detail |
| C1H1g00770 | 1:3,323,021-3,323,475 | - | - | - | - | - | - | Detail |
| C1H1g06431 | 1:3,332,283-3,336,538 | - | C2H1g12786 | CX1g006673 | LOC_Os01g07910 | Os01g0174300 | - | Detail |
| C1H1g24697 | 1:3,339,300-3,341,987 | - | C2H1g18737 | CX1g002809 | LOC_Os01g07920 | Os01g0174500 | - | Detail |
| C1H1g15491 | 1:3,342,384-3,343,373 | - | C2H1g16794 | CX1g002809 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| C1H1g13210 | 1:3,347,432-3,354,686 | - | C2H1g29949 | CX1g001687 | LOC_Os01g07940 | Os01g0174700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023488 | 2:21,731,401-21,734,452 | - | C1H2g03331 | C2H2g27568 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| CX2g022047 | 2:21,735,753-21,736,536 | - | C1H2g17655 | C2H4g03036 | - | - | - | Detail |
| CX2g020733 | 2:21,739,623-21,741,823 | - | C1H2g12247 | C2H2g08333 | LOC_Os02g38140 | Os02g0594900 | - | Detail |
| CX2g024257 | 2:21,752,774-21,755,388 | - | C1H2g09203 | C2H2g24282 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| CX2g021248 | 2:21,766,374-21,766,898 | + | - | - | LOC_Os02g38170 | Os02g0595200 | - | Detail |
| CX2g021227 | 2:21,770,317-21,771,217 | - | C1H2g18043 | C2H2g12684 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| CX2g019326 | 2:21,774,066-21,774,674 | - | - | - | LOC_Os02g38190 | Os02g0595400 | - | Detail |
| CX2g023998 | 2:21,775,541-21,779,005 | - | C1H2g28766 | C2H2g27779 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| CX2g024107 | 2:21,780,786-21,782,189 | + | C1H2g02203 | C2H2g10443 | LOC_Os02g38210 | Os02g0595700 | - | Detail |
| CX2g023123 | 2:21,785,069-21,788,696 | + | C1H2g15529 | C2H2g13918 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| CX2g024625 | 2:21,789,900-21,791,586 | - | C1H2g13753 | C2H2g12990 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| CX2g021096 | 2:21,796,006-21,798,684 | - | C1H2g12816 | C2H2g05640 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| CX2g020732 | 2:21,801,175-21,809,807 | - | C1H2g21293 | C2H2g05424 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| CX2g020902 | 2:21,811,441-21,813,307 | + | C1H2g16769 | C2H2g17152 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| CX2g024363 | 2:21,816,225-21,817,425 | - | C1H2g00956 | C2H2g06504 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| CX2g024642 | 2:21,822,066-21,825,233 | - | C1H2g15841 | C2H2g22627 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| CX2g023192 | 2:21,831,735-21,833,795 | + | C1H2g27617 | C2H2g10630 | LOC_Os02g38320 | Os02g0596700 | - | Detail |
| CX2g022944 | 2:21,834,984-21,835,362 | - | C1H2g26547 | C2H2g00192 | LOC_Os02g38330 | - | - | Detail |
| CX2g023966 | 2:21,837,165-21,841,003 | + | C1H2g07087 | C2H2g14667 | LOC_Os02g38340 | Os02g0596900 | - | Detail |
| CX2g022445 | 2:21,842,185-21,844,156 | - | C1H2g18301 | C2H2g08738 | LOC_Os02g38350 | Os02g0597000 | - | Detail |