| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19774 | 1:31,558,335-31,558,910 | - | C2H1g21565 | CX1g001275 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| C1H1g14773 | 1:31,570,139-31,570,813 | + | C2H1g19363 | CX1g002960 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| C1H1g29926 | 1:31,574,562-31,577,996 | + | C2H1g10096 | CX1g003525 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| C1H1g29563 | 1:31,578,140-31,580,710 | - | C2H1g19797 | CX1g003586 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| C1H1g16875 | 1:31,583,436-31,585,130 | - | C2H1g10064 | CX1g004163 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| C1H1g09267 | 1:31,587,352-31,590,262 | - | C2H1g01874 | CX1g006982 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| C1H1g18254 | 1:31,591,978-31,593,781 | + | C2H1g04373 | CX1g004599 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| C1H1g00383 | 1:31,595,780-31,599,262 | - | C2H1g19266 | CX1g001311 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| C1H1g00574 | 1:31,603,439-31,609,060 | + | C2H1g14897 | CX1g004790 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| C1H1g31694 | 1:31,623,931-31,629,351 | + | C2H1g11131 | CX1g000601 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| C1H1g07002 | 1:31,645,583-31,650,779 | + | C2H1g22191 | CX1g006439 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| C1H1g10107 | 1:31,651,133-31,653,130 | + | C2H1g03571 | CX1g006609 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| C1H1g13635 | 1:31,653,422-31,656,214 | - | C2H1g17085 | CX1g003404 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| C1H1g07003 | 1:31,660,931-31,664,136 | + | C2H1g00983 | CX1g003333 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| C1H1g07552 | 1:31,665,317-31,665,983 | + | C2H1g24837 | CX1g005332 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| C1H1g26345 | 1:31,666,736-31,670,635 | - | C2H1g22767 | CX1g001176 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| C1H1g02922 | 1:31,671,706-31,672,679 | - | C2H1g05497 | CX1g000140 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| C1H1g09497 | 1:31,673,488-31,680,561 | - | C2H1g26726 | CX1g003313 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| C1H1g22933 | 1:31,682,588-31,686,819 | - | C2H1g11920 | CX1g003450 | LOC_Os01g61720 | Os01g0833800 | - | Detail |
| C1H1g08789 | 1:31,701,594-31,702,292 | + | C2H1g11202 | - | LOC_Os01g61750 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023488 | 2:21,731,401-21,734,452 | - | C1H2g03331 | C2H2g27568 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| CX2g022047 | 2:21,735,753-21,736,536 | - | C1H2g17655 | C2H4g03036 | - | - | - | Detail |
| CX2g020733 | 2:21,739,623-21,741,823 | - | C1H2g12247 | C2H2g08333 | LOC_Os02g38140 | Os02g0594900 | - | Detail |
| CX2g024257 | 2:21,752,774-21,755,388 | - | C1H2g09203 | C2H2g24282 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| CX2g021248 | 2:21,766,374-21,766,898 | + | - | - | LOC_Os02g38170 | Os02g0595200 | - | Detail |
| CX2g021227 | 2:21,770,317-21,771,217 | - | C1H2g18043 | C2H2g12684 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| CX2g019326 | 2:21,774,066-21,774,674 | - | - | - | LOC_Os02g38190 | Os02g0595400 | - | Detail |
| CX2g023998 | 2:21,775,541-21,779,005 | - | C1H2g28766 | C2H2g27779 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| CX2g024107 | 2:21,780,786-21,782,189 | + | C1H2g02203 | C2H2g10443 | LOC_Os02g38210 | Os02g0595700 | - | Detail |
| CX2g023123 | 2:21,785,069-21,788,696 | + | C1H2g15529 | C2H2g13918 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| CX2g024625 | 2:21,789,900-21,791,586 | - | C1H2g13753 | C2H2g12990 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| CX2g021096 | 2:21,796,006-21,798,684 | - | C1H2g12816 | C2H2g05640 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| CX2g020732 | 2:21,801,175-21,809,807 | - | C1H2g21293 | C2H2g05424 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| CX2g020902 | 2:21,811,441-21,813,307 | + | C1H2g16769 | C2H2g17152 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| CX2g024363 | 2:21,816,225-21,817,425 | - | C1H2g00956 | C2H2g06504 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| CX2g024642 | 2:21,822,066-21,825,233 | - | C1H2g15841 | C2H2g22627 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| CX2g023192 | 2:21,831,735-21,833,795 | + | C1H2g27617 | C2H2g10630 | LOC_Os02g38320 | Os02g0596700 | - | Detail |
| CX2g022944 | 2:21,834,984-21,835,362 | - | C1H2g26547 | C2H2g00192 | LOC_Os02g38330 | - | - | Detail |
| CX2g023966 | 2:21,837,165-21,841,003 | + | C1H2g07087 | C2H2g14667 | LOC_Os02g38340 | Os02g0596900 | - | Detail |
| CX2g022445 | 2:21,842,185-21,844,156 | - | C1H2g18301 | C2H2g08738 | LOC_Os02g38350 | Os02g0597000 | - | Detail |