| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12548 | 4:29,870,782-29,873,701 | - | C2H4g22497 | CX4g036015 | LOC_Os04g57510 | Os04g0670600 | - | Detail |
| C1H4g28067 | 4:29,874,706-29,880,746 | + | C2H4g29038 | CX4g033656 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| C1H4g24932 | 4:29,889,703-29,891,698 | - | C2H4g16367 | CX4g035876 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| C1H4g07972 | 4:29,895,898-29,897,966 | - | C2H4g09789 | CX4g035340 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| C1H4g22743 | 4:29,898,781-29,902,244 | - | C2H4g30313 | CX4g036253 | LOC_Os04g57550 | Os04g0671200 | - | Detail |
| C1H4g10516 | 4:29,903,190-29,907,373 | - | C2H4g09887 | CX4g034946 | LOC_Os04g57560 | Os04g0671300 | PAO5, OsPAO5, OsAO2, AO2 | Detail |
| C1H4g18642 | 4:29,914,984-29,917,878 | - | C2H4g11022 | CX4g034217 | LOC_Os04g57590 | Os04g0671700 | OsDJ-1C | Detail |
| C1H4g10863 | 4:29,919,853-29,923,225 | - | C2H4g26599 | CX4g034187 | LOC_Os04g57600 | Os04g0671800 | - | Detail |
| C1H4g29876 | 4:29,925,187-29,932,498 | - | C2H4g28020 | CX4g036532 | LOC_Os04g57610 | Os04g0671900 | - | Detail |
| C1H4g03758 | 4:29,946,857-29,949,895 | - | C2H4g22256 | CX4g032181 | LOC_Os04g57630 | Os04g0672100 | OsPSKR2 | Detail |
| C1H4g28972 | 4:29,961,894-29,967,859 | - | C2H4g16737 | CX4g031927 | LOC_Os04g57640 | Os04g0672200 | - | Detail |
| C1H4g18744 | 4:29,969,283-29,973,110 | - | C2H4g14699 | CX4g031948 | LOC_Os04g57650 | Os04g0672300 | - | Detail |
| C1H4g12099 | 4:29,979,174-29,981,416 | - | C2H4g22256 | CX4g032181 | LOC_Os04g57660 | Os04g0672600 | - | Detail |
| C1H4g02898 | 4:29,987,329-29,990,623 | + | C2H4g13935 | CX4g031387 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| C1H4g21333 | 4:29,991,614-29,994,014 | + | C2H4g25125 | CX4g034255 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| C1H4g29753 | 4:29,995,710-30,000,759 | - | C2H4g28032 | CX4g032895 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| C1H4g17441 | 4:30,023,341-30,023,957 | + | C2H4g17256 | CX4g036002 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| C1H4g06545 | 4:30,030,545-30,034,430 | - | C2H4g16666 | CX4g033276 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| C1H4g12522 | 4:30,037,329-30,037,956 | - | C2H4g21541 | CX4g032931 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| C1H4g09977 | 4:30,039,911-30,040,867 | - | C2H4g03386 | - | LOC_Os04g57760 | Os04g0674000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019460 | 2:20,726,822-20,731,504 | - | C1H2g14408 | C2H2g01642 | LOC_Os02g36390 | Os02g0573300 | - | Detail |
| CX2g024276 | 2:20,732,425-20,736,639 | - | C1H2g24873 | C2H2g30509 | LOC_Os02g36400 | Os02g0573400 | - | Detail |
| CX2g020921 | 2:20,747,200-20,748,702 | + | C1H2g05601 | C2H2g08756 | LOC_Os02g36414 | Os02g0573500 | OsSTP10 | Detail |
| CX2g020951 | 2:20,754,277-20,758,675 | + | C1H2g10973 | C2H2g09875 | LOC_Os02g36440 | Os02g0574000 | OsSTP11 | Detail |
| CX2g022867 | 2:20,760,201-20,766,641 | + | C1H2g08696 | C2H2g09875 | LOC_Os02g36450 | Os02g0574100 | OsSTP12 | Detail |
| CX2g023380 | 2:20,773,989-20,775,389 | - | C1H2g26321 | C2H2g27731 | LOC_Os02g36490 | Os02g0574500 | - | Detail |
| CX2g021643 | 2:20,778,149-20,778,298 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019584 | 2:20,781,598-20,783,298 | - | C1H2g01417 | C2H2g24693 | LOC_Os02g39540 | Os02g0608300 | - | Detail |
| CX2g022800 | 2:20,784,404-20,787,350 | - | C1H2g26695 | C2H2g03275 | LOC_Os02g36500 | Os02g0574600 | - | Detail |
| CX2g023534 | 2:20,800,769-20,802,211 | + | - | - | LOC_Os02g36510 | Os02g0574800 | - | Detail |
| CX2g021281 | 2:20,807,997-20,808,866 | + | C1H2g29373 | C2H2g05236 | LOC_Os02g36520 | Os02g0574900 | - | Detail |
| CX2g020251 | 2:20,813,339-20,813,605 | - | - | - | LOC_Os02g36530 | Os02g0575000 | - | Detail |
| CX2g024458 | 2:20,816,092-20,818,174 | - | C1H2g25681 | C2H2g18945 | LOC_Os02g36550 | Os02g0575200 | - | Detail |
| CX2g019124 | 2:20,822,611-20,822,886 | + | - | - | - | Os02g0216150 | - | Detail |
| CX2g022708 | 2:20,825,903-20,833,141 | + | C1H2g15480 | C2H2g24665 | LOC_Os02g36570 | Os02g0575500 | - | Detail |
| CX2g022589 | 2:20,850,110-20,850,283 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g020311 | 2:20,851,001-20,853,375 | + | C1H2g18328 | C2H2g06377 | LOC_Os02g36600 | Os02g0575800 | - | Detail |
| CX2g019770 | 2:20,863,110-20,866,458 | + | C1H2g09592 | C2H2g14296 | LOC_Os02g36619 | Os02g0575900 | - | Detail |
| CX2g023703 | 2:20,883,647-20,884,523 | - | C1H2g24323 | C2H2g07585 | LOC_Os02g36680 | Os02g0576400 | - | Detail |
| CX2g024108 | 2:20,889,255-20,892,503 | - | C1H2g24390 | C2H2g27181 | LOC_Os02g36700 | Os02g0576600 | OsSUT5Z, OsSUT5 | Detail |