| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08783 | 3:1,504,261-1,506,546 | - | C1H3g26036 | CX3g029309 | - | Os03g0130750 | - | Detail |
| C2H3g05534 | 3:1,508,678-1,514,731 | + | C1H3g08344 | CX3g026936 | LOC_Os03g03870 | Os03g0130800 | - | Detail |
| C2H3g28810 | 3:1,523,479-1,528,964 | + | C1H3g09568 | CX3g028472 | LOC_Os03g03880 | Os03g0130900 | - | Detail |
| C2H3g29451 | 3:1,530,366-1,532,643 | + | C1H3g20543 | CX3g030865 | LOC_Os03g03890 | Os03g0131000 | - | Detail |
| C2H3g00921 | 3:1,533,299-1,538,488 | - | C1H3g20869 | CX3g029241 | LOC_Os03g03900 | Os03g0131100 | OsNLP1 | Detail |
| C2H3g05397 | 3:1,544,045-1,547,098 | - | C1H3g21207 | CX3g027343 | LOC_Os03g03910 | Os03g0131200 | - | Detail |
| C2H3g25663 | 3:1,547,910-1,552,708 | - | C1H3g29193 | CX3g027343 | LOC_Os03g03920 | Os03g0131300 | - | Detail |
| C2H3g07948 | 3:1,555,384-1,561,050 | - | C1H3g04201 | CX3g029745 | LOC_Os03g03930 | Os03g0131400 | - | Detail |
| C2H3g06029 | 3:1,561,223-1,564,251 | + | C1H3g28233 | CX3g026999 | LOC_Os03g03949 | Os03g0131500 | - | Detail |
| C2H3g05494 | 3:1,565,001-1,566,058 | + | C1H3g02854 | CX3g028529 | LOC_Os03g03980 | Os03g0131800 | - | Detail |
| C2H3g22495 | 3:1,567,205-1,568,371 | - | C1H3g31581 | CX3g029556 | LOC_Os03g03990 | Os03g0131900 | OscpSRP43, cpSRP43 | Detail |
| C2H3g11143 | 3:1,571,772-1,575,611 | + | C1H3g06072 | CX3g026513 | LOC_Os03g04000 | Os03g0132000 | - | Detail |
| C2H3g03337 | 3:1,582,243-1,584,005 | + | C1H3g07116 | CX3g026620 | LOC_Os03g04020 | Os03g0132200 | - | Detail |
| C2H3g07678 | 3:1,587,785-1,591,137 | - | C1H3g18409 | CX3g028694 | LOC_Os03g04030 | Os03g0132300 | - | Detail |
| C2H3g02332 | 3:1,607,893-1,612,709 | + | C1H3g11603 | CX3g030334 | LOC_Os03g04050 | Os03g0132800 | OsBSK1-1 | Detail |
| C2H3g25865 | 3:1,614,014-1,615,711 | - | C1H3g17948 | CX3g030345 | LOC_Os03g04070 | Os03g0133000 | NAC22, ONAC022 | Detail |
| C2H3g07517 | 3:1,623,374-1,623,721 | + | C1H3g06331 | CX3g030686 | LOC_Os03g04080 | Os03g0133100 | - | Detail |
| C2H3g25074 | 3:1,627,819-1,631,744 | + | C1H3g25947 | CX3g029725 | LOC_Os03g04100 | Os03g0133300 | ESV1, Os-ESV1, LA3 | Detail |
| C2H3g16071 | 3:1,632,868-1,633,560 | + | C1H3g11058 | CX3g025596 | LOC_Os03g04110 | Os03g0133400 | CEBiP, OsCEBiP | Detail |
| C2H3g08230 | 3:1,636,315-1,638,452 | - | C1H3g20995 | CX3g031140 | LOC_Os03g04120 | Os03g0133500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022264 | 2:20,546,228-20,546,491 | + | - | - | - | - | - | Detail |
| CX2g023226 | 2:20,548,993-20,551,558 | - | C1H2g01402 | C2H2g05039 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| CX2g024448 | 2:20,560,065-20,560,364 | - | C1H2g04979 | C2H7g12708 | - | - | - | Detail |
| CX2g023024 | 2:20,562,214-20,562,459 | + | - | - | - | - | - | Detail |
| CX2g024634 | 2:20,580,932-20,581,081 | + | - | - | - | - | - | Detail |
| CX2g021593 | 2:20,590,360-20,596,697 | + | C1H2g07162 | C2H2g17098 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| CX2g021871 | 2:20,600,928-20,611,065 | - | C1H2g03952 | C2H2g13289 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| CX2g020519 | 2:20,615,666-20,615,818 | + | - | - | - | Os09g0414600 | - | Detail |
| CX2g021301 | 2:20,618,689-20,619,354 | + | - | - | - | - | - | Detail |
| CX2g024389 | 2:20,643,187-20,643,423 | - | - | - | - | - | - | Detail |
| CX2g024086 | 2:20,644,906-20,646,387 | - | C1H2g26097 | C2H2g15028 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| CX2g021366 | 2:20,655,888-20,658,945 | + | C1H2g26668 | C2H2g18750 | LOC_Os02g36300 | Os02g0572200 | - | Detail |
| CX2g018873 | 2:20,659,540-20,660,583 | - | C1H2g17745 | C2H2g09753 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| CX2g021053 | 2:20,664,041-20,665,159 | - | C1H2g26668 | C2H2g17582 | LOC_Os02g36330 | Os02g0475101 | - | Detail |
| CX2g024208 | 2:20,665,817-20,666,215 | - | - | C2H2g16287 | LOC_Os02g49170 | - | - | Detail |
| CX2g023356 | 2:20,667,361-20,671,490 | - | C1H2g26185 | C2H2g16620 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| CX2g020691 | 2:20,681,469-20,681,780 | + | - | - | - | - | - | Detail |
| CX2g023112 | 2:20,689,445-20,691,104 | - | C1H2g25932 | C2H2g00545 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| CX2g023654 | 2:20,702,565-20,703,755 | - | C1H2g10452 | C2H2g01996 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| CX2g018889 | 2:20,722,198-20,725,035 | + | C1H2g13546 | C2H2g05333 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |