| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05949 | 2:31,595,085-31,596,950 | + | C1H2g11260 | CX2g019099 | LOC_Os02g56420 | Os02g0807900 | - | Detail |
| C2H2g06516 | 2:31,597,036-31,597,712 | + | - | - | - | - | - | Detail |
| C2H2g04085 | 2:31,605,843-31,608,438 | + | C1H2g25312 | CX2g019099 | LOC_Os02g56630 | Os02g0811200 | - | Detail |
| C2H2g14829 | 2:31,626,572-31,627,990 | + | C1H2g01106 | CX2g024895 | LOC_Os02g56460 | Os02g0808800 | OsCCR1 | Detail |
| C2H2g21626 | 2:31,634,207-31,635,668 | + | C1H2g24089 | CX2g022856 | LOC_Os02g56690 | Os02g0811600 | - | Detail |
| C2H2g15313 | 2:31,638,690-31,640,894 | + | C1H2g12168 | CX2g019555 | LOC_Os02g56700 | Os02g0811800 | OsCCR10 | Detail |
| C2H2g23157 | 2:31,642,351-31,643,097 | - | C1H2g01325 | CX2g021951 | LOC_Os02g46300 | Os02g0811902 | - | Detail |
| C2H2g09312 | 2:31,644,299-31,645,701 | + | C1H2g10464 | CX2g024617 | LOC_Os02g56720 | Os02g0812000 | - | Detail |
| C2H2g19326 | 2:31,650,438-31,659,116 | + | C1H2g05404 | CX2g024879 | LOC_Os02g56740 | Os02g0812400 | - | Detail |
| C2H2g02254 | 2:31,660,232-31,662,778 | + | C1H2g10963 | CX2g023091 | LOC_Os02g56750 | Os02g0812500 | - | Detail |
| C2H2g09710 | 2:31,664,336-31,667,671 | + | C1H2g03230 | CX2g023091 | LOC_Os02g56760 | Os02g0812600 | - | Detail |
| C2H2g19171 | 2:31,668,467-31,670,426 | + | C1H2g07056 | CX2g023091 | LOC_Os02g56800 | Os02g0812700 | - | Detail |
| C2H2g28532 | 2:31,673,459-31,675,311 | + | C1H2g00231 | CX2g023091 | LOC_Os02g56810 | Os02g0813083 | - | Detail |
| C2H2g15955 | 2:31,676,911-31,680,051 | + | C1H2g30055 | CX2g023091 | LOC_Os02g56820 | Os02g0813083 | - | Detail |
| C2H2g28568 | 2:31,680,338-31,681,417 | + | C1H2g14316 | CX2g023249 | LOC_Os02g56820 | Os02g0813166 | - | Detail |
| C2H2g25608 | 2:31,683,649-31,685,821 | + | C1H2g01150 | CX2g023091 | LOC_Os02g56840 | Os02g0813350 | - | Detail |
| C2H2g15090 | 2:31,687,593-31,698,218 | + | C1H2g13338 | CX2g022536 | LOC_Os02g56850 | Os02g0813500 | - | Detail |
| C2H2g10206 | 2:31,709,532-31,710,929 | + | C1H2g08007 | CX2g020189 | LOC_Os02g56860 | Os02g0813600 | - | Detail |
| C2H2g05971 | 2:31,715,048-31,723,808 | - | C1H2g08319 | CX2g019469 | LOC_Os02g56880 | Os02g0813800 | - | Detail |
| C2H2g25448 | 2:31,729,243-31,730,124 | - | C1H2g07591 | CX2g020760 | LOC_Os02g56900 | Os02g0814000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022264 | 2:20,546,228-20,546,491 | + | - | - | - | - | - | Detail |
| CX2g023226 | 2:20,548,993-20,551,558 | - | C1H2g01402 | C2H2g05039 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| CX2g024448 | 2:20,560,065-20,560,364 | - | C1H2g04979 | C2H7g12708 | - | - | - | Detail |
| CX2g023024 | 2:20,562,214-20,562,459 | + | - | - | - | - | - | Detail |
| CX2g024634 | 2:20,580,932-20,581,081 | + | - | - | - | - | - | Detail |
| CX2g021593 | 2:20,590,360-20,596,697 | + | C1H2g07162 | C2H2g17098 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| CX2g021871 | 2:20,600,928-20,611,065 | - | C1H2g03952 | C2H2g13289 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| CX2g020519 | 2:20,615,666-20,615,818 | + | - | - | - | Os09g0414600 | - | Detail |
| CX2g021301 | 2:20,618,689-20,619,354 | + | - | - | - | - | - | Detail |
| CX2g024389 | 2:20,643,187-20,643,423 | - | - | - | - | - | - | Detail |
| CX2g024086 | 2:20,644,906-20,646,387 | - | C1H2g26097 | C2H2g15028 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| CX2g021366 | 2:20,655,888-20,658,945 | + | C1H2g26668 | C2H2g18750 | LOC_Os02g36300 | Os02g0572200 | - | Detail |
| CX2g018873 | 2:20,659,540-20,660,583 | - | C1H2g17745 | C2H2g09753 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| CX2g021053 | 2:20,664,041-20,665,159 | - | C1H2g26668 | C2H2g17582 | LOC_Os02g36330 | Os02g0475101 | - | Detail |
| CX2g024208 | 2:20,665,817-20,666,215 | - | - | C2H2g16287 | LOC_Os02g49170 | - | - | Detail |
| CX2g023356 | 2:20,667,361-20,671,490 | - | C1H2g26185 | C2H2g16620 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| CX2g020691 | 2:20,681,469-20,681,780 | + | - | - | - | - | - | Detail |
| CX2g023112 | 2:20,689,445-20,691,104 | - | C1H2g25932 | C2H2g00545 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| CX2g023654 | 2:20,702,565-20,703,755 | - | C1H2g10452 | C2H2g01996 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| CX2g018889 | 2:20,722,198-20,725,035 | + | C1H2g13546 | C2H2g05333 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |