| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03260 | 1:912,363-919,808 | - | C2H1g11248 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C1H1g11508 | 1:920,249-922,765 | - | C2H1g00360 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C1H1g03575 | 1:924,063-925,404 | - | C2H1g23693 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C1H1g25620 | 1:926,529-928,682 | + | C2H1g04453 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C1H1g21397 | 1:932,755-940,012 | - | C2H1g07428 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C1H1g11884 | 1:944,374-947,490 | + | C2H1g24271 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C1H1g21163 | 1:948,164-950,482 | - | C2H1g00075 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C1H1g02205 | 1:958,485-963,423 | - | C2H1g03352 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C1H1g30654 | 1:977,812-978,306 | - | C2H1g22579 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| C1H1g02007 | 1:984,886-985,311 | - | C2H1g21567 | CX1g003296 | LOC_Os01g03130 | Os01g0121600 | - | Detail |
| C1H1g03560 | 1:985,449-992,024 | - | C2H1g27556 | CX1g003396 | LOC_Os01g03144 | Os01g0121700 | - | Detail |
| C1H1g30771 | 1:994,207-997,876 | + | C2H1g21458 | CX1g005704 | LOC_Os01g03160 | Os01g0121800 | - | Detail |
| C1H1g24391 | 1:1,000,069-1,001,455 | + | C2H1g00690 | CX1g001540 | LOC_Os01g03170 | Os01g0121900 | - | Detail |
| C1H1g11317 | 1:1,002,756-1,004,166 | + | C2H1g13526 | CX1g002300 | LOC_Os01g03170 | Os01g0121950 | - | Detail |
| C1H1g01717 | 1:1,009,256-1,009,863 | - | - | - | - | - | - | Detail |
| C1H1g19600 | 1:1,013,804-1,014,904 | + | C2H1g11805 | CX1g005293 | LOC_Os01g03190 | Os01g0122200 | - | Detail |
| C1H1g20214 | 1:1,016,310-1,017,271 | + | C2H1g11417 | CX1g005293 | LOC_Os01g03210 | Os01g0122701 | - | Detail |
| C1H1g21487 | 1:1,026,445-1,028,717 | - | C2H1g13088 | CX1g000755 | LOC_Os01g03260 | Os01g0119500 | - | Detail |
| C1H1g18595 | 1:1,036,871-1,038,039 | + | C2H1g20613 | CX1g001540 | LOC_Os01g03270 | Os01g0123700 | - | Detail |
| C1H1g10726 | 1:1,048,394-1,049,381 | - | C2H1g02744 | CX1g001540 | LOC_Os01g03290 | Os01g0123700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022264 | 2:20,546,228-20,546,491 | + | - | - | - | - | - | Detail |
| CX2g023226 | 2:20,548,993-20,551,558 | - | C1H2g01402 | C2H2g05039 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| CX2g024448 | 2:20,560,065-20,560,364 | - | C1H2g04979 | C2H7g12708 | - | - | - | Detail |
| CX2g023024 | 2:20,562,214-20,562,459 | + | - | - | - | - | - | Detail |
| CX2g024634 | 2:20,580,932-20,581,081 | + | - | - | - | - | - | Detail |
| CX2g021593 | 2:20,590,360-20,596,697 | + | C1H2g07162 | C2H2g17098 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| CX2g021871 | 2:20,600,928-20,611,065 | - | C1H2g03952 | C2H2g13289 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| CX2g020519 | 2:20,615,666-20,615,818 | + | - | - | - | Os09g0414600 | - | Detail |
| CX2g021301 | 2:20,618,689-20,619,354 | + | - | - | - | - | - | Detail |
| CX2g024389 | 2:20,643,187-20,643,423 | - | - | - | - | - | - | Detail |
| CX2g024086 | 2:20,644,906-20,646,387 | - | C1H2g26097 | C2H2g15028 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| CX2g021366 | 2:20,655,888-20,658,945 | + | C1H2g26668 | C2H2g18750 | LOC_Os02g36300 | Os02g0572200 | - | Detail |
| CX2g018873 | 2:20,659,540-20,660,583 | - | C1H2g17745 | C2H2g09753 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| CX2g021053 | 2:20,664,041-20,665,159 | - | C1H2g26668 | C2H2g17582 | LOC_Os02g36330 | Os02g0475101 | - | Detail |
| CX2g024208 | 2:20,665,817-20,666,215 | - | - | C2H2g16287 | LOC_Os02g49170 | - | - | Detail |
| CX2g023356 | 2:20,667,361-20,671,490 | - | C1H2g26185 | C2H2g16620 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| CX2g020691 | 2:20,681,469-20,681,780 | + | - | - | - | - | - | Detail |
| CX2g023112 | 2:20,689,445-20,691,104 | - | C1H2g25932 | C2H2g00545 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| CX2g023654 | 2:20,702,565-20,703,755 | - | C1H2g10452 | C2H2g01996 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| CX2g018889 | 2:20,722,198-20,725,035 | + | C1H2g13546 | C2H2g05333 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |