| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g01697 | 9:18,907,183-18,911,124 | + | C2H9g21433 | CX9g056918 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| C1H9g21274 | 9:18,913,040-18,922,259 | - | C2H9g26806 | CX9g057338 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| C1H9g18913 | 9:18,930,687-18,931,931 | - | C2H9g05243 | CX9g057269 | LOC_Os09g39050 | Os09g0563950 | - | Detail |
| C1H9g07375 | 9:18,933,374-18,935,186 | - | C2H9g27013 | CX9g058103 | LOC_Os09g39060 | Os09g0564000 | - | Detail |
| C1H9g22045 | 9:18,938,382-18,941,213 | - | C2H9g21279 | CX9g058103 | LOC_Os09g39070 | Os09g0564200 | - | Detail |
| C1H9g27358 | 9:18,961,003-18,962,435 | - | C2H9g00317 | CX9g058103 | LOC_Os09g39120 | Os09g0564700 | - | Detail |
| C1H9g06269 | 9:18,972,824-18,975,733 | + | C2H9g29707 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C1H9g03665 | 9:18,984,162-18,986,733 | - | C2H9g17980 | CX9g055784 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| C1H9g23294 | 9:18,989,037-18,990,919 | - | C2H9g06735 | CX9g055878 | LOC_Os09g39190 | Os09g0565300 | - | Detail |
| C1H9g02800 | 9:18,992,248-18,994,333 | - | C2H9g05243 | CX9g055878 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| C1H9g15519 | 9:18,994,553-18,998,288 | - | C2H9g29461 | CX9g056354 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| C1H9g26476 | 9:19,000,231-19,017,250 | + | C2H9g27919 | CX9g057714 | - | Os09g0565500 | - | Detail |
| C1H9g13374 | 9:19,018,415-19,022,439 | + | C2H9g07424 | CX9g057785 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| C1H9g26902 | 9:19,024,274-19,025,479 | + | C2H9g05946 | CX9g055093 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| C1H9g14496 | 9:19,027,577-19,028,557 | - | - | - | - | - | - | Detail |
| C1H9g23958 | 9:19,028,585-19,029,799 | + | C2H9g19055 | CX9g057620 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| C1H9g25655 | 9:19,031,108-19,037,130 | - | C2H9g15395 | CX9g056260 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| C1H9g18076 | 9:19,043,978-19,047,177 | - | C2H9g06176 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C1H9g21987 | 9:19,052,322-19,059,181 | - | C2H9g09064 | CX9g056096 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| C1H9g31128 | 9:19,060,904-19,062,271 | - | C2H9g08732 | CX9g056096 | LOC_Os09g39350 | Os09g0567000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022264 | 2:20,546,228-20,546,491 | + | - | - | - | - | - | Detail |
| CX2g023226 | 2:20,548,993-20,551,558 | - | C1H2g01402 | C2H2g05039 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| CX2g024448 | 2:20,560,065-20,560,364 | - | C1H2g04979 | C2H7g12708 | - | - | - | Detail |
| CX2g023024 | 2:20,562,214-20,562,459 | + | - | - | - | - | - | Detail |
| CX2g024634 | 2:20,580,932-20,581,081 | + | - | - | - | - | - | Detail |
| CX2g021593 | 2:20,590,360-20,596,697 | + | C1H2g07162 | C2H2g17098 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| CX2g021871 | 2:20,600,928-20,611,065 | - | C1H2g03952 | C2H2g13289 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| CX2g020519 | 2:20,615,666-20,615,818 | + | - | - | - | Os09g0414600 | - | Detail |
| CX2g021301 | 2:20,618,689-20,619,354 | + | - | - | - | - | - | Detail |
| CX2g024389 | 2:20,643,187-20,643,423 | - | - | - | - | - | - | Detail |
| CX2g024086 | 2:20,644,906-20,646,387 | - | C1H2g26097 | C2H2g15028 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| CX2g021366 | 2:20,655,888-20,658,945 | + | C1H2g26668 | C2H2g18750 | LOC_Os02g36300 | Os02g0572200 | - | Detail |
| CX2g018873 | 2:20,659,540-20,660,583 | - | C1H2g17745 | C2H2g09753 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| CX2g021053 | 2:20,664,041-20,665,159 | - | C1H2g26668 | C2H2g17582 | LOC_Os02g36330 | Os02g0475101 | - | Detail |
| CX2g024208 | 2:20,665,817-20,666,215 | - | - | C2H2g16287 | LOC_Os02g49170 | - | - | Detail |
| CX2g023356 | 2:20,667,361-20,671,490 | - | C1H2g26185 | C2H2g16620 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| CX2g020691 | 2:20,681,469-20,681,780 | + | - | - | - | - | - | Detail |
| CX2g023112 | 2:20,689,445-20,691,104 | - | C1H2g25932 | C2H2g00545 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| CX2g023654 | 2:20,702,565-20,703,755 | - | C1H2g10452 | C2H2g01996 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| CX2g018889 | 2:20,722,198-20,725,035 | + | C1H2g13546 | C2H2g05333 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |