| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g27733 | 6:1,928,161-1,928,514 | - | C2H6g07839 | - | LOC_Os06g05430 | Os06g0147000 | - | Detail |
| C1H6g29536 | 6:1,952,298-1,952,531 | - | C2H6g00111 | - | LOC_Os06g05480 | Os06g0147400 | - | Detail |
| C1H6g21336 | 6:1,973,822-1,982,827 | + | C2H5g04532 | - | LOC_Os10g30951 | Os10g0446600 | - | Detail |
| C1H6g26195 | 6:1,987,522-1,991,398 | - | C2H6g25201 | CX6g045184 | LOC_Os06g05520 | Os06g0147800 | OsMKK1 | Detail |
| C1H6g30016 | 6:1,995,922-1,998,972 | - | C2H6g23587 | CX6g044845 | LOC_Os06g05530 | Os06g0148000 | - | Detail |
| C1H6g15370 | 6:2,005,225-2,007,042 | + | C2H6g12987 | CX6g042295 | LOC_Os06g05550 | Os06g0148200 | - | Detail |
| C1H6g07577 | 6:2,008,886-2,013,812 | + | C2H6g05508 | CX6g041906 | LOC_Os06g05560 | Os06g0148500 | - | Detail |
| C1H6g18806 | 6:2,016,355-2,017,536 | + | C2H6g12497 | CX6g041906 | LOC_Os06g05580 | Os06g0148600 | - | Detail |
| C1H6g03332 | 6:2,019,710-2,020,885 | + | C2H6g02799 | CX6g041906 | LOC_Os06g05590 | Os06g0148700 | - | Detail |
| C1H6g29176 | 6:2,024,621-2,025,880 | + | C2H6g17289 | CX6g043676 | LOC_Os06g05610 | Os06g0148900 | - | Detail |
| C1H6g09526 | 6:2,032,708-2,035,019 | + | C2H6g26996 | CX6g042404 | LOC_Os06g05630 | Os06g0149100 | - | Detail |
| C1H6g12514 | 6:2,033,428-2,034,277 | - | - | - | - | Os06g0149133 | - | Detail |
| C1H6g12180 | 6:2,034,477-2,040,683 | - | C2H6g20749 | CX6g043655 | LOC_Os06g05640 | Os06g0149200 | - | Detail |
| C1H6g06513 | 6:2,041,547-2,043,465 | - | C2H6g07829 | - | LOC_Os06g05650 | Os06g0149300 | - | Detail |
| C1H6g15189 | 6:2,043,685-2,047,573 | + | C2H6g19535 | CX6g043755 | LOC_Os06g05660 | Os06g0149400 | - | Detail |
| C1H6g02447 | 6:2,048,849-2,051,302 | + | C2H6g04120 | CX6g045419 | LOC_Os06g05670 | Os06g0149500 | - | Detail |
| C1H6g05891 | 6:2,052,615-2,054,753 | + | C2H6g13034 | CX6g045092 | LOC_Os06g05690 | Os06g0149700 | - | Detail |
| C1H6g18341 | 6:2,057,741-2,060,079 | + | C2H6g07684 | CX6g045092 | LOC_Os06g05700 | Os06g0149900 | - | Detail |
| C1H6g11814 | 6:2,061,359-2,062,197 | + | C2H6g29709 | CX6g044360 | LOC_Os06g05710 | - | - | Detail |
| C1H6g14393 | 6:2,062,890-2,064,684 | - | C2H6g19328 | CX6g043171 | LOC_Os06g05720 | Os06g0150100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022264 | 2:20,546,228-20,546,491 | + | - | - | - | - | - | Detail |
| CX2g023226 | 2:20,548,993-20,551,558 | - | C1H2g01402 | C2H2g05039 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| CX2g024448 | 2:20,560,065-20,560,364 | - | C1H2g04979 | C2H7g12708 | - | - | - | Detail |
| CX2g023024 | 2:20,562,214-20,562,459 | + | - | - | - | - | - | Detail |
| CX2g024634 | 2:20,580,932-20,581,081 | + | - | - | - | - | - | Detail |
| CX2g021593 | 2:20,590,360-20,596,697 | + | C1H2g07162 | C2H2g17098 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| CX2g021871 | 2:20,600,928-20,611,065 | - | C1H2g03952 | C2H2g13289 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| CX2g020519 | 2:20,615,666-20,615,818 | + | - | - | - | Os09g0414600 | - | Detail |
| CX2g021301 | 2:20,618,689-20,619,354 | + | - | - | - | - | - | Detail |
| CX2g024389 | 2:20,643,187-20,643,423 | - | - | - | - | - | - | Detail |
| CX2g024086 | 2:20,644,906-20,646,387 | - | C1H2g26097 | C2H2g15028 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| CX2g021366 | 2:20,655,888-20,658,945 | + | C1H2g26668 | C2H2g18750 | LOC_Os02g36300 | Os02g0572200 | - | Detail |
| CX2g018873 | 2:20,659,540-20,660,583 | - | C1H2g17745 | C2H2g09753 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| CX2g021053 | 2:20,664,041-20,665,159 | - | C1H2g26668 | C2H2g17582 | LOC_Os02g36330 | Os02g0475101 | - | Detail |
| CX2g024208 | 2:20,665,817-20,666,215 | - | - | C2H2g16287 | LOC_Os02g49170 | - | - | Detail |
| CX2g023356 | 2:20,667,361-20,671,490 | - | C1H2g26185 | C2H2g16620 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| CX2g020691 | 2:20,681,469-20,681,780 | + | - | - | - | - | - | Detail |
| CX2g023112 | 2:20,689,445-20,691,104 | - | C1H2g25932 | C2H2g00545 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| CX2g023654 | 2:20,702,565-20,703,755 | - | C1H2g10452 | C2H2g01996 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| CX2g018889 | 2:20,722,198-20,725,035 | + | C1H2g13546 | C2H2g05333 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |