| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02593 | 4:29,326,920-29,329,525 | - | C1H4g30864 | CX4g036239 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| C2H4g28957 | 4:29,330,937-29,334,919 | + | C1H4g09343 | CX4g033681 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| C2H4g00001 | 4:29,335,587-29,337,864 | - | C1H4g05828 | CX4g031794 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| C2H4g12242 | 4:29,346,217-29,350,384 | + | C1H4g09596 | CX4g036304 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| C2H4g11326 | 4:29,350,962-29,353,825 | + | C1H4g30725 | CX4g034037 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| C2H4g21652 | 4:29,354,782-29,355,237 | - | - | CX4g034903 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| C2H4g19860 | 4:29,362,450-29,363,014 | + | C1H4g22043 | CX4g033683 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g10951 | 4:29,379,023-29,380,236 | - | C1H4g10999 | CX4g036202 | LOC_Os04g35610 | Os04g0118700 | - | Detail |
| C2H4g15180 | 4:29,387,199-29,389,061 | + | C1H4g22979 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g00735 | 4:29,390,985-29,393,367 | + | C1H4g03241 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03747 | 4:29,396,383-29,398,015 | + | C1H4g01851 | CX4g031479 | LOC_Os04g57080 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03474 | 4:29,400,385-29,401,819 | + | C1H4g29852 | CX4g031652 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g06767 | 4:29,415,602-29,416,401 | - | C1H4g05569 | CX4g036468 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| C2H4g00020 | 4:29,417,068-29,427,230 | - | C1H4g31368 | CX4g031983 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| C2H4g16878 | 4:29,428,962-29,429,486 | + | - | CX4g036271 | LOC_Os04g43720 | Os04g0517600 | - | Detail |
| C2H4g20070 | 4:29,431,894-29,432,340 | - | - | - | - | - | - | Detail |
| C2H4g09686 | 4:29,431,991-29,432,428 | + | - | - | - | - | - | Detail |
| C2H4g30626 | 4:29,434,012-29,437,838 | - | C1H4g07804 | CX4g034693 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| C2H4g27314 | 4:29,439,637-29,441,953 | + | C1H4g29276 | CX4g034777 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| C2H4g03010 | 4:29,447,466-29,448,038 | - | C1H4g22147 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022636 | 2:20,127,798-20,128,313 | - | C1H2g18536 | C2H2g30399 | LOC_Os02g35240 | Os02g0558700 | - | Detail |
| CX2g022726 | 2:20,130,629-20,130,781 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g021445 | 2:20,138,237-20,141,127 | + | C1H2g29418 | C2H2g30329 | LOC_Os02g35300 | Os02g0559300 | - | Detail |
| CX2g022839 | 2:20,141,948-20,144,074 | - | C1H2g18296 | C2H2g07663 | LOC_Os02g35310 | Os02g0559400 | - | Detail |
| CX2g019879 | 2:20,147,640-20,148,077 | - | C1H2g24849 | C2H2g23968 | LOC_Os02g35315 | Os02g0560450 | - | Detail |
| CX2g019263 | 2:20,159,118-20,162,429 | + | C1H2g04292 | C2H2g07152 | LOC_Os02g35320 | Os02g0560700 | - | Detail |
| CX2g021460 | 2:20,166,130-20,167,095 | - | C1H2g09758 | C2H2g27531 | LOC_Os02g35329 | Os02g0560600 | EL5, EL5.3 | Detail |
| CX2g020926 | 2:20,173,045-20,173,653 | - | C1H2g09758 | C2H2g27531 | LOC_Os02g35440 | Os02g0561900 | - | Detail |
| CX2g024333 | 2:20,179,315-20,180,190 | + | C1H2g29582 | C2H2g28464 | LOC_Os02g35450 | Os02g0562100 | XRCC3 | Detail |
| CX2g024829 | 2:20,187,505-20,192,512 | + | C1H2g02101 | C2H2g25054 | LOC_Os02g35470 | Os02g0562300 | - | Detail |
| CX2g023645 | 2:20,193,554-20,196,307 | - | - | C2H2g26588 | LOC_Os02g35480 | Os02g0562400 | - | Detail |
| CX2g022844 | 2:20,198,207-20,202,729 | - | C1H2g13542 | C2H2g08496 | LOC_Os02g35490 | Os02g0562600 | - | Detail |
| CX2g023726 | 2:20,217,436-20,221,475 | + | C1H2g26275 | C2H2g13323 | LOC_Os02g35500 | Os02g0562700 | - | Detail |
| CX2g022313 | 2:20,232,576-20,233,652 | + | C1H2g07639 | C2H2g00364 | LOC_Os02g35530 | Os02g0563000 | - | Detail |
| CX2g020181 | 2:20,263,107-20,264,846 | - | - | - | LOC_Os02g35560 | Os02g0563800 | - | Detail |
| CX2g024419 | 2:20,273,429-20,276,149 | - | C1H2g01238 | C2H2g24813 | LOC_Os02g35590 | Os02g0564000 | OsGST2 | Detail |
| CX2g020609 | 2:20,276,422-20,279,121 | + | C1H2g18288 | C2H2g14395 | LOC_Os02g35600 | Os02g0564100 | - | Detail |
| CX2g024095 | 2:20,280,360-20,280,560 | + | - | C2H2g18420 | LOC_Os02g35610 | Os02g0564200 | - | Detail |
| CX2g019029 | 2:20,282,779-20,284,806 | - | C1H2g08212 | C2H2g23834 | LOC_Os02g35620 | Os02g0564300 | - | Detail |
| CX2g019190 | 2:20,287,945-20,293,504 | + | C1H2g00388 | C2H2g28792 | LOC_Os02g35630 | Os02g0564400 | - | Detail |