| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16001 | 3:10,173,735-10,175,036 | + | C2H3g05954 | CX3g026260 | LOC_Os03g20230 | Os03g0318400 | - | Detail |
| C1H3g07890 | 3:10,192,334-10,193,545 | + | C2H3g08312 | CX3g025491 | LOC_Os03g20230 | Os03g0317900 | - | Detail |
| C1H3g20479 | 3:10,200,586-10,201,880 | + | C2H3g29183 | CX3g028957 | LOC_Os03g20290 | Os03g0318400 | - | Detail |
| C1H3g31254 | 3:10,203,377-10,209,318 | - | C2H3g10315 | CX3g024974 | LOC_Os03g20300 | Os03g0318500 | - | Detail |
| C1H3g27797 | 3:10,209,753-10,214,845 | - | C2H3g15586 | CX3g025701 | LOC_Os03g20310 | Os03g0318600 | OsTGA3 | Detail |
| C1H3g25597 | 3:10,233,111-10,233,644 | + | C2H3g06773 | CX3g031095 | LOC_Os03g20330 | Os03g0319000 | - | Detail |
| C1H3g29099 | 3:10,242,233-10,246,996 | + | C2H3g23539 | CX3g030494 | LOC_Os03g20340 | Os03g0319100 | - | Detail |
| C1H3g19829 | 3:10,254,192-10,255,623 | + | C2H3g28901 | CX3g028434 | LOC_Os03g20350 | Os03g0319200 | - | Detail |
| C1H3g23043 | 3:10,259,154-10,260,436 | + | C2H3g27412 | CX3g031077 | LOC_Os03g20370 | Os03g0319300 | OsCam1-1, OsCaM1-1, OsCaM1 | Detail |
| C1H3g21490 | 3:10,262,867-10,268,355 | - | C2H3g25279 | CX3g026317 | LOC_Os03g20380 | Os03g0319400 | - | Detail |
| C1H3g25971 | 3:10,281,082-10,284,619 | - | C2H3g09371 | CX3g025212 | LOC_Os03g20410 | Os03g0320000 | OsSIP2 | Detail |
| C1H3g08252 | 3:10,290,492-10,298,627 | - | C2H3g22340 | CX3g029293 | LOC_Os03g20420 | Os03g0320100 | - | Detail |
| C1H3g09342 | 3:10,303,100-10,304,444 | + | C2H3g01972 | CX3g029244 | LOC_Os03g20430 | Os03g0320400 | - | Detail |
| C1H3g07396 | 3:10,310,058-10,310,714 | - | C2H3g13875 | CX3g027813 | LOC_Os03g20440 | Os03g0320600 | - | Detail |
| C1H3g21035 | 3:10,326,442-10,331,578 | + | C2H3g23140 | CX3g030303 | LOC_Os03g20450 | Os03g0320800 | - | Detail |
| C1H3g22135 | 3:10,334,633-10,337,401 | + | C2H3g14660 | CX3g027683 | LOC_Os03g20460 | Os03g0320900 | V2, pt/mtGK | Detail |
| C1H3g27273 | 3:10,338,765-10,341,238 | + | C2H3g12919 | CX3g026494 | LOC_Os03g20470 | Os03g0321000 | - | Detail |
| C1H3g19861 | 3:10,351,468-10,352,613 | + | C2H3g01230 | CX3g029583 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| C1H3g31579 | 3:10,352,696-10,352,992 | - | C2H3g17781 | - | - | - | - | Detail |
| C1H3g05314 | 3:10,360,363-10,366,269 | - | C2H3g10177 | CX3g030418 | LOC_Os03g20520 | Os03g0321400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022074 | 2:19,652,511-19,657,550 | + | C1H2g24078 | C2H2g08024 | LOC_Os02g34500 | Os02g0550000 | DMD1 | Detail |
| CX2g020686 | 2:19,658,974-19,660,767 | - | C1H2g08678 | C2H2g03515 | LOC_Os02g34510 | Os02g0550100 | - | Detail |
| CX2g020472 | 2:19,664,043-19,666,312 | + | C1H2g14925 | C2H2g14993 | LOC_Os02g34530 | Os02g0550300 | - | Detail |
| CX2g024696 | 2:19,667,117-19,668,112 | - | - | - | LOC_Os02g34540 | Os02g0550400 | - | Detail |
| CX2g022290 | 2:19,670,171-19,673,208 | - | C1H2g20025 | C2H2g20189 | LOC_Os02g34560 | Os02g0550600 | OsCYT-INV1, OsCyt-inv1 | Detail |
| CX2g023794 | 2:19,680,404-19,683,153 | - | C1H2g03053 | C2H2g13633 | LOC_Os02g34570 | Os02g0550700 | - | Detail |
| CX2g022967 | 2:19,686,299-19,688,905 | + | C1H2g28652 | C2H2g03451 | LOC_Os02g34580 | Os02g0550800 | - | Detail |
| CX2g020128 | 2:19,689,950-19,692,082 | - | C1H2g26960 | C2H2g01217 | LOC_Os02g34590 | Os02g0550900 | - | Detail |
| CX2g021370 | 2:19,694,372-19,698,665 | - | C1H2g10938 | C2H2g27878 | LOC_Os02g34600 | Os02g0551100 | SAPK6, OsSAPK6, OSRK1 | Detail |
| CX2g020085 | 2:19,709,758-19,713,474 | - | C1H2g05505 | C2H2g04354 | LOC_Os02g34630 | Os02g0551400 | - | Detail |
| CX2g023039 | 2:19,722,185-19,722,838 | + | - | - | LOC_Os02g34640 | Os02g0551600 | - | Detail |
| CX2g019578 | 2:19,728,810-19,733,698 | - | C1H2g28422 | C2H2g11603 | LOC_Os02g34650 | Os02g0551700 | - | Detail |
| CX2g024928 | 2:19,741,111-19,743,743 | + | C1H2g17140 | C2H2g06693 | LOC_Os02g34680 | Os02g0551900 | - | Detail |
| CX2g020066 | 2:19,750,844-19,754,764 | + | C1H2g28294 | C2H2g17052 | LOC_Os02g34690 | Os02g0552000 | - | Detail |
| CX2g023003 | 2:19,755,670-19,757,448 | + | C1H2g19462 | C2H2g30236 | LOC_Os02g34700 | Os02g0552100 | - | Detail |
| CX2g022859 | 2:19,763,139-19,764,158 | - | C1H2g02456 | C2H2g06007 | LOC_Os02g34710 | Os02g0552200 | - | Detail |
| CX2g024586 | 2:19,774,689-19,775,056 | - | C1H2g04622 | C2H2g30348 | LOC_Os02g34730 | Os02g0552400 | - | Detail |
| CX2g019233 | 2:19,777,335-19,777,586 | + | - | - | - | Os02g0552550 | - | Detail |
| CX2g020243 | 2:19,777,713-19,780,050 | - | C1H2g26533 | C2H2g10619 | LOC_Os02g34750 | Os02g0552600 | - | Detail |
| CX2g022010 | 2:19,780,702-19,784,944 | - | C1H2g21819 | C2H2g05120 | LOC_Os02g34800 | Os02g0553000 | - | Detail |