| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17162 | 3:7,605,121-7,605,828 | + | C2H3g04568 | CX3g029077 | LOC_Os03g15630 | Os03g0262700 | - | Detail |
| C1H3g28720 | 3:7,610,593-7,615,998 | + | C2H3g27525 | CX3g031108 | LOC_Os03g15650 | Os03g0262900 | GLUP6/GEF, OsVPS9A, VPS9a, GPA2/VPS9a, GPA2, GLUP6 | Detail |
| C1H3g05394 | 3:7,617,326-7,618,087 | - | C2H3g13896 | CX3g028305 | LOC_Os03g15660 | Os03g0263000 | - | Detail |
| C1H3g03212 | 3:7,636,151-7,637,899 | + | C2H3g08920 | CX3g027760 | LOC_Os03g15680 | Os03g0263300 | NSP2, Os NSP2, NSP2 | Detail |
| C1H3g04873 | 3:7,641,156-7,644,889 | + | C2H3g28518 | CX3g028003 | LOC_Os03g15690 | Os03g0263400 | - | Detail |
| C1H3g22836 | 3:7,645,217-7,647,921 | - | C2H3g08217 | CX3g030022 | LOC_Os03g15700 | Os03g0263500 | - | Detail |
| C1H3g14620 | 3:7,649,425-7,651,004 | - | C2H3g20978 | CX3g031268 | LOC_Os03g15710 | Os03g0263600 | OsSTRL2 | Detail |
| C1H3g20320 | 3:7,652,738-7,655,214 | + | C2H3g30231 | CX3g028260 | LOC_Os03g15720 | Os03g0263700 | - | Detail |
| C1H3g15450 | 3:7,658,188-7,660,841 | + | C2H3g12908 | CX3g027745 | LOC_Os03g15730 | Os03g0263800 | - | Detail |
| C1H3g29175 | 3:7,664,084-7,666,630 | + | C2H3g16128 | CX3g026739 | LOC_Os03g15740 | Os03g0263900 | - | Detail |
| C1H3g24070 | 3:7,668,862-7,672,660 | - | C2H3g07359 | CX3g027842 | LOC_Os03g15750 | Os03g0264000 | - | Detail |
| C1H3g19617 | 3:7,680,014-7,684,027 | + | C2H3g24590 | CX3g030764 | LOC_Os03g15770 | Os03g0264300 | - | Detail |
| C1H3g02519 | 3:7,684,563-7,689,264 | - | C2H3g11898 | CX3g029488 | LOC_Os03g15780 | Os03g0264400 | - | Detail |
| C1H3g09016 | 3:7,693,794-7,695,167 | - | C2H3g27599 | CX3g027532 | LOC_Os03g15790 | Os03g0264600 | - | Detail |
| C1H3g19306 | 3:7,698,709-7,700,154 | - | C2H3g02876 | CX3g025411 | LOC_Os03g15800 | Os03g0264700 | - | Detail |
| C1H3g00653 | 3:7,700,729-7,708,709 | - | C2H3g07031 | CX3g030279 | LOC_Os03g15810 | Os03g0264800 | - | Detail |
| C1H3g22318 | 3:7,717,463-7,720,980 | + | C2H3g21284 | CX3g026411 | LOC_Os03g15840 | Os03g0265100 | PLS2, OsSQD2.3 | Detail |
| C1H3g16209 | 3:7,721,516-7,723,744 | - | C2H3g07665 | CX3g026305 | LOC_Os03g15850 | Os03g0265200 | - | Detail |
| C1H3g16456 | 3:7,726,714-7,729,733 | + | C2H3g25611 | CX3g029962 | LOC_Os03g15860 | Os03g0265300 | - | Detail |
| C1H3g27080 | 3:7,730,423-7,732,746 | + | C2H3g15049 | CX3g031298 | LOC_Os03g15870 | Os03g0265400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022074 | 2:19,652,511-19,657,550 | + | C1H2g24078 | C2H2g08024 | LOC_Os02g34500 | Os02g0550000 | DMD1 | Detail |
| CX2g020686 | 2:19,658,974-19,660,767 | - | C1H2g08678 | C2H2g03515 | LOC_Os02g34510 | Os02g0550100 | - | Detail |
| CX2g020472 | 2:19,664,043-19,666,312 | + | C1H2g14925 | C2H2g14993 | LOC_Os02g34530 | Os02g0550300 | - | Detail |
| CX2g024696 | 2:19,667,117-19,668,112 | - | - | - | LOC_Os02g34540 | Os02g0550400 | - | Detail |
| CX2g022290 | 2:19,670,171-19,673,208 | - | C1H2g20025 | C2H2g20189 | LOC_Os02g34560 | Os02g0550600 | OsCYT-INV1, OsCyt-inv1 | Detail |
| CX2g023794 | 2:19,680,404-19,683,153 | - | C1H2g03053 | C2H2g13633 | LOC_Os02g34570 | Os02g0550700 | - | Detail |
| CX2g022967 | 2:19,686,299-19,688,905 | + | C1H2g28652 | C2H2g03451 | LOC_Os02g34580 | Os02g0550800 | - | Detail |
| CX2g020128 | 2:19,689,950-19,692,082 | - | C1H2g26960 | C2H2g01217 | LOC_Os02g34590 | Os02g0550900 | - | Detail |
| CX2g021370 | 2:19,694,372-19,698,665 | - | C1H2g10938 | C2H2g27878 | LOC_Os02g34600 | Os02g0551100 | SAPK6, OsSAPK6, OSRK1 | Detail |
| CX2g020085 | 2:19,709,758-19,713,474 | - | C1H2g05505 | C2H2g04354 | LOC_Os02g34630 | Os02g0551400 | - | Detail |
| CX2g023039 | 2:19,722,185-19,722,838 | + | - | - | LOC_Os02g34640 | Os02g0551600 | - | Detail |
| CX2g019578 | 2:19,728,810-19,733,698 | - | C1H2g28422 | C2H2g11603 | LOC_Os02g34650 | Os02g0551700 | - | Detail |
| CX2g024928 | 2:19,741,111-19,743,743 | + | C1H2g17140 | C2H2g06693 | LOC_Os02g34680 | Os02g0551900 | - | Detail |
| CX2g020066 | 2:19,750,844-19,754,764 | + | C1H2g28294 | C2H2g17052 | LOC_Os02g34690 | Os02g0552000 | - | Detail |
| CX2g023003 | 2:19,755,670-19,757,448 | + | C1H2g19462 | C2H2g30236 | LOC_Os02g34700 | Os02g0552100 | - | Detail |
| CX2g022859 | 2:19,763,139-19,764,158 | - | C1H2g02456 | C2H2g06007 | LOC_Os02g34710 | Os02g0552200 | - | Detail |
| CX2g024586 | 2:19,774,689-19,775,056 | - | C1H2g04622 | C2H2g30348 | LOC_Os02g34730 | Os02g0552400 | - | Detail |
| CX2g019233 | 2:19,777,335-19,777,586 | + | - | - | - | Os02g0552550 | - | Detail |
| CX2g020243 | 2:19,777,713-19,780,050 | - | C1H2g26533 | C2H2g10619 | LOC_Os02g34750 | Os02g0552600 | - | Detail |
| CX2g022010 | 2:19,780,702-19,784,944 | - | C1H2g21819 | C2H2g05120 | LOC_Os02g34800 | Os02g0553000 | - | Detail |