| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00465 | 4:21,949,305-21,949,736 | - | C1H4g16892 | - | LOC_Os04g42850 | - | - | Detail |
| C2H4g23428 | 4:21,955,992-21,961,795 | + | C1H4g02011 | CX4g033250 | LOC_Os04g42860 | Os04g0507700 | - | Detail |
| C2H4g12434 | 4:21,962,396-21,964,296 | - | C1H4g25437 | CX4g036242 | LOC_Os04g42870 | Os04g0507800 | - | Detail |
| C2H4g04255 | 4:21,964,471-21,966,166 | + | C1H4g05518 | CX4g032853 | LOC_Os04g42880 | Os04g0507900 | - | Detail |
| C2H4g13577 | 4:21,969,979-21,970,602 | - | - | CX4g035638 | LOC_Os04g42889 | - | - | Detail |
| C2H4g02916 | 4:21,971,608-21,974,671 | - | C1H4g12307 | CX4g033139 | LOC_Os04g42900 | Os04g0508000 | - | Detail |
| C2H4g04232 | 4:21,975,336-21,978,353 | + | C1H4g06876 | CX4g032690 | LOC_Os04g42910 | Os04g0508100 | - | Detail |
| C2H4g05860 | 4:21,979,292-21,984,831 | + | C1H4g08533 | CX4g033875 | LOC_Os04g42920 | Os04g0508200 | - | Detail |
| C2H4g05577 | 4:21,986,204-21,988,757 | + | C1H4g17316 | CX4g035105 | LOC_Os04g42930 | Os04g0508300 | OsGrxC2.2 | Detail |
| C2H4g08577 | 4:21,989,395-21,990,537 | - | - | CX4g036552 | LOC_Os04g42940 | Os04g0508400 | - | Detail |
| C2H4g24307 | 4:21,993,729-21,995,690 | - | C1H4g28976 | CX4g036081 | LOC_Os04g42950 | Os04g0508500 | Os2R_MYB45 | Detail |
| C2H4g01800 | 4:22,005,104-22,006,447 | + | C1H2g19268 | CX4g034855 | LOC_Os04g42960 | Os04g0508600 | - | Detail |
| C2H4g15606 | 4:22,010,532-22,014,498 | - | C1H4g09744 | CX4g031554 | LOC_Os04g42980 | Os04g0508800 | - | Detail |
| C2H4g18756 | 4:22,019,614-22,023,317 | - | C1H4g09860 | CX4g035042 | LOC_Os04g42990 | Os04g0508900 | - | Detail |
| C2H4g21092 | 4:22,032,568-22,038,012 | + | C1H4g03726 | CX4g031481 | LOC_Os04g43020 | Os04g0509000 | - | Detail |
| C2H4g17989 | 4:22,038,821-22,046,565 | + | C1H4g25656 | CX4g035238 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g25209 | 4:22,046,130-22,049,928 | - | C1H4g05629 | CX4g036052 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| C2H4g20441 | 4:22,052,563-22,073,010 | - | C1H4g11981 | CX4g034232 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| C2H4g11339 | 4:22,075,791-22,076,232 | + | C1H4g16776 | CX4g036588 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| C2H4g01906 | 4:22,082,684-22,084,180 | + | C1H4g16652 | CX2g024932 | LOC_Os04g43070 | Os04g0509600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003199 | 1:10,499,792-10,501,567 | - | C1H1g25209 | C2H1g29597 | LOC_Os01g21180 | Os01g0314300 | - | Detail |
| CX1g005440 | 1:10,511,151-10,511,348 | + | - | - | - | Os01g0863100 | - | Detail |
| CX1g000744 | 1:10,515,423-10,521,338 | + | C1H1g16998 | C2H1g29491 | - | Os01g0314600 | - | Detail |
| CX1g002764 | 1:10,524,808-10,528,272 | + | C1H1g13637 | C2H1g14843 | LOC_Os01g21240 | Os01g0335700 | - | Detail |
| CX1g005523 | 1:10,528,974-10,529,752 | - | C1H1g06454 | C2H1g24956 | - | - | - | Detail |
| CX1g002182 | 1:10,540,243-10,540,897 | - | C1H1g25861 | C2H1g17632 | LOC_Os01g21250 | Os01g0314800 | OsLEA9, qCTB1e | Detail |
| CX1g000287 | 1:10,551,321-10,558,946 | + | C1H1g23934 | C2H1g12277 | LOC_Os01g21310 | Os01g0315700 | - | Detail |
| CX1g003327 | 1:10,559,523-10,563,372 | - | C1H1g05468 | C2H1g04682 | LOC_Os01g21320 | Os01g0315800 | - | Detail |
| CX1g006538 | 1:10,565,731-10,565,886 | + | - | - | - | - | - | Detail |
| CX1g002762 | 1:10,577,889-10,579,136 | - | - | - | LOC_Os01g21380 | Os01g0316100 | - | Detail |
| CX1g000332 | 1:10,581,708-10,583,901 | - | C1H1g27049 | C2H1g21130 | LOC_Os01g21410 | Os01g0316500 | - | Detail |
| CX1g001744 | 1:10,599,150-10,600,403 | + | C1H1g21030 | C2H1g00121 | - | Os01g0273000 | - | Detail |
| CX1g001212 | 1:10,603,113-10,610,043 | + | C1H1g29623 | C2H1g10654 | LOC_Os01g21450 | Os01g0316900 | - | Detail |
| CX1g004942 | 1:10,614,086-10,614,241 | + | - | - | - | - | - | Detail |
| CX1g006492 | 1:10,618,625-10,618,777 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g001429 | 1:10,627,381-10,628,361 | + | C1H1g23934 | C2H1g12277 | LOC_Os01g21560 | Os01g0317800 | - | Detail |
| CX1g006153 | 1:10,635,859-10,636,842 | + | C1H1g23934 | C2H1g12277 | LOC_Os01g21580 | Os01g0317800 | - | Detail |
| CX1g002658 | 1:10,650,828-10,651,576 | + | - | - | - | - | - | Detail |
| CX1g005507 | 1:10,652,112-10,654,373 | - | - | - | - | Os01g0318202 | - | Detail |
| CX1g004299 | 1:10,662,933-10,667,214 | + | C1H1g15013 | C2H1g18874 | LOC_Os01g21610 | Os01g0318700 | - | Detail |