| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g20827 | 5:8,245,932-8,251,122 | - | C1H5g11977 | CX5g038548 | LOC_Os06g31220 | Os05g0576800 | OsMPK17 | Detail |
| C2H5g07689 | 5:8,313,900-8,323,930 | + | C1H5g04657 | CX5g040162 | LOC_Os05g17990 | Os10g0127700 | - | Detail |
| C2H5g13658 | 5:8,379,165-8,381,363 | - | C1H5g22792 | CX5g036945 | LOC_Os05g18470 | Os05g0267100 | OsSec14-27 | Detail |
| C2H5g30084 | 5:8,395,251-8,397,118 | - | C1H5g00261 | CX5g037126 | - | - | - | Detail |
| C2H5g02166 | 5:8,441,229-8,444,682 | - | C1H5g14126 | CX5g040351 | LOC_Os05g18470 | Os05g0267800 | OsSec14-13 | Detail |
| C2H5g24703 | 5:8,454,136-8,459,601 | - | C1H5g17826 | - | - | - | - | Detail |
| C2H5g14934 | 5:8,460,155-8,460,515 | - | - | CX5g039639 | - | - | - | Detail |
| C2H5g23620 | 5:8,475,004-8,480,407 | + | C1H5g02676 | CX5g040409 | - | - | - | Detail |
| C2H5g05756 | 5:8,485,158-8,492,597 | - | C1H5g22785 | CX5g040154 | LOC_Os05g18604 | Os05g0268500 | - | Detail |
| C2H5g09042 | 5:8,507,103-8,510,619 | - | - | - | LOC_Os05g18650 | Os05g0269000 | - | Detail |
| C2H5g25305 | 5:8,512,312-8,515,720 | - | C1H5g01079 | CX5g038524 | LOC_Os05g18660 | Os05g0269100 | - | Detail |
| C2H5g16000 | 5:8,523,566-8,525,866 | - | C1H5g00417 | CX5g037457 | LOC_Os05g18670 | Os05g0269200 | - | Detail |
| C2H5g09440 | 5:8,556,766-8,563,793 | - | C1H5g29345 | CX5g039610 | LOC_Os05g18730 | Os05g0269500 | OsGCS1, HAP2 | Detail |
| C2H5g01291 | 5:8,578,431-8,581,212 | - | C1H5g06392 | CX5g040303 | LOC_Os05g19110 | Os05g0273500 | - | Detail |
| C2H5g27387 | 5:8,589,149-8,591,889 | + | C1H5g19255 | CX5g040250 | LOC_Os05g19040 | Os05g0272900 | - | Detail |
| C2H5g24419 | 5:8,593,580-8,596,904 | - | C1H5g00223 | CX5g040752 | LOC_Os05g19030 | Os05g0272800 | - | Detail |
| C2H5g02457 | 5:8,607,779-8,610,301 | - | C1H5g23932 | CX5g040554 | LOC_Os05g19000 | Os05g0272200 | - | Detail |
| C2H5g29689 | 5:8,620,798-8,622,288 | - | C1H5g16929 | CX5g039881 | LOC_Os05g18950 | Os05g0271900 | - | Detail |
| C2H5g26648 | 5:8,641,095-8,641,607 | - | - | - | - | - | - | Detail |
| C2H5g11842 | 5:8,649,212-8,649,737 | - | C1H5g22296 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022178 | 2:19,017,843-19,019,042 | - | C1H2g14103 | C2H2g10969 | LOC_Os02g33590 | Os02g0539200 | OsPUB33 | Detail |
| CX2g023671 | 2:19,038,557-19,039,390 | + | - | - | - | - | - | Detail |
| CX2g020089 | 2:19,042,244-19,042,988 | + | - | - | - | - | - | Detail |
| CX2g024045 | 2:19,044,816-19,052,686 | + | C1H2g13439 | C2H2g02484 | LOC_Os02g33610 | Os02g0539600 | GRY79 | Detail |
| CX2g022464 | 2:19,059,404-19,062,848 | - | C1H2g29583 | C2H2g06091 | LOC_Os02g33630 | Os02g0539900 | - | Detail |
| CX2g023578 | 2:19,121,079-19,122,596 | + | C1H2g22578 | C2H2g10969 | LOC_Os02g33680 | Os02g0540700 | - | Detail |
| CX2g022926 | 2:19,143,844-19,147,406 | + | C1H2g12544 | C2H2g28169 | LOC_Os02g33710 | Os02g0541325 | - | Detail |
| CX2g023335 | 2:19,151,994-19,152,611 | - | - | - | - | - | - | Detail |
| CX2g022361 | 2:19,159,129-19,163,207 | - | C1H2g02670 | C2H2g10478 | LOC_Os02g33730 | Os02g0541700 | - | Detail |
| CX2g022174 | 2:19,166,203-19,166,595 | + | C1H2g31676 | C2H2g27952 | LOC_Os02g33740 | Os02g0541900 | - | Detail |
| CX2g018878 | 2:19,170,592-19,174,570 | - | C1H2g30293 | C2H2g00187 | LOC_Os02g33750 | Os02g0542200 | - | Detail |
| CX2g023996 | 2:19,183,269-19,187,003 | + | C1H2g03056 | - | LOC_Os02g33770 | Os02g0542400 | OsGTγ-1, OsGTgamma-1 | Detail |
| CX2g023080 | 2:19,187,463-19,188,509 | + | C1H2g07889 | C2H2g23863 | LOC_Os02g33780 | Os02g0542500 | - | Detail |
| CX2g022789 | 2:19,198,369-19,199,395 | - | C1H2g27793 | C2H2g18501 | LOC_Os02g33790 | - | - | Detail |
| CX2g024405 | 2:19,202,145-19,202,489 | - | - | - | LOC_Os02g33800 | - | - | Detail |
| CX2g019174 | 2:19,206,718-19,207,492 | - | C1H2g21560 | C2H2g07033 | LOC_Os02g33820 | Os02g0543000 | - | Detail |
| CX2g020648 | 2:19,210,640-19,213,485 | - | C1H2g07478 | C2H2g22437 | LOC_Os02g33830 | Os02g0543100 | - | Detail |
| CX2g021797 | 2:19,214,092-19,215,573 | + | - | - | LOC_Os02g33840 | Os02g0543200 | - | Detail |
| CX2g023537 | 2:19,221,518-19,224,877 | + | C1H2g21330 | C2H2g26343 | LOC_Os02g33860 | Os02g0543400 | SGW5 | Detail |
| CX2g020736 | 2:19,243,479-19,245,830 | - | C1H2g10313 | C2H2g00010 | LOC_Os02g33890 | Os02g0297200 | - | Detail |