| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01496 | 10:12,354,837-12,361,303 | - | C1H10g25661 | CX10g009967 | LOC_Os10g26060 | Os10g0400200 | OsGluA2 | Detail |
| C2H10g30625 | 10:12,377,978-12,379,465 | - | C1H10g05076 | CX10g010708 | LOC_Os10g26110 | Os10g0400500 | - | Detail |
| C2H10g05646 | 10:12,389,767-12,394,943 | - | C1H10g09798 | CX10g009792 | LOC_Os10g26130 | Os10g0400800 | - | Detail |
| C2H10g14652 | 10:12,395,645-12,405,886 | + | C1H10g17747 | CX10g007582 | LOC_Os10g26140 | Os10g0400900 | - | Detail |
| C2H10g27373 | 10:12,406,860-12,407,105 | - | - | CX10g009486 | LOC_Os10g26150 | Os10g0401000 | - | Detail |
| C2H10g03850 | 10:12,412,016-12,416,410 | + | C1H10g07798 | CX10g008323 | LOC_Os10g26164 | Os10g0401100 | - | Detail |
| C2H10g09742 | 10:12,419,983-12,425,509 | - | C1H10g12994 | CX10g010682 | LOC_Os10g26280 | Os10g0402200 | ORC3, OsORC3 | Detail |
| C2H10g26563 | 10:12,432,730-12,434,691 | - | C1H10g19566 | CX10g007841 | LOC_Os10g26290 | Os10g0402400 | - | Detail |
| C2H10g21713 | 10:12,478,202-12,479,946 | - | C1H10g09520 | CX10g007319 | LOC_Os10g26340 | Os10g0403000 | PLA1, pla1, plt1, CYP78A11 | Detail |
| C2H10g29616 | 10:12,501,678-12,506,313 | + | C1H10g29036 | CX10g008675 | LOC_Os10g26390 | Os10g0403700 | - | Detail |
| C2H10g19378 | 10:12,515,899-12,516,262 | - | C1H10g23860 | CX10g010536 | LOC_Os10g26410 | Os10g0403800 | OsbHLH174 | Detail |
| C2H10g14621 | 10:12,542,333-12,546,565 | + | C1H10g20492 | CX10g008425 | LOC_Os10g26430 | Os09g0408300 | - | Detail |
| C2H10g15527 | 10:12,558,884-12,559,261 | + | C1H10g22107 | CX10g010293 | LOC_Os10g26460 | Os10g0404300 | OsbHLH173 | Detail |
| C2H10g02076 | 10:12,564,180-12,576,238 | + | C1H10g29328 | CX10g007588 | LOC_Os10g26470 | Os10g0404500 | OsSUT3 | Detail |
| C2H10g30475 | 10:12,577,110-12,577,733 | + | C1H10g31230 | - | LOC_Os10g26480 | - | - | Detail |
| C2H10g25009 | 10:12,588,609-12,590,444 | + | C1H10g19702 | CX10g009122 | LOC_Os10g26500 | Os10g0404900 | - | Detail |
| C2H10g00267 | 10:12,606,286-12,611,983 | + | C1H10g31687 | CX10g009203 | LOC_Os10g26520 | Os10g0405100 | - | Detail |
| C2H10g29752 | 10:12,614,280-12,616,713 | + | C1H10g29879 | CX10g010584 | LOC_Os10g26540 | Os10g0405300 | - | Detail |
| C2H10g24843 | 10:12,624,076-12,629,487 | + | C1H10g05975 | CX10g009344 | LOC_Os10g26560 | Os10g0405500 | PAIR3 | Detail |
| C2H10g12168 | 10:12,629,911-12,634,472 | - | C1H10g05197 | CX10g007362 | LOC_Os10g26570 | Os10g0405600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019759 | 2:18,721,215-18,721,802 | + | C1H4g02994 | C2H4g01788 | LOC_Os02g32990 | Os02g0532800 | OsBIC2 | Detail |
| CX2g023689 | 2:18,725,938-18,728,926 | + | C1H2g22832 | C2H2g22707 | LOC_Os02g33000 | Os02g0532900 | - | Detail |
| CX2g019017 | 2:18,730,496-18,735,355 | - | C1H2g16813 | C2H2g18655 | LOC_Os02g33010 | Os02g0533000 | - | Detail |
| CX2g024724 | 2:18,739,076-18,741,511 | + | C1H2g00080 | C2H2g19682 | LOC_Os02g33020 | Os02g0533200 | - | Detail |
| CX2g023010 | 2:18,742,788-18,745,133 | + | C1H2g31211 | C2H2g19682 | LOC_Os02g33030 | Os02g0533300 | OsalphaCA1, OsαCA1 | Detail |
| CX2g021594 | 2:18,750,362-18,751,018 | + | - | C2H4g20884 | LOC_Os02g33060 | Os02g0533700 | - | Detail |
| CX2g021223 | 2:18,753,299-18,754,041 | - | - | - | - | - | - | Detail |
| CX2g021454 | 2:18,754,576-18,757,527 | + | C1H2g23938 | C2H2g19843 | LOC_Os02g33080 | Os02g0533900 | - | Detail |
| CX2g020347 | 2:18,758,441-18,759,016 | - | - | - | LOC_Os02g33090 | Os02g0534000 | - | Detail |
| CX2g022901 | 2:18,787,059-18,791,520 | + | C1H2g03846 | C2H2g12855 | LOC_Os02g33110 | Os02g0534400 | OsCIN1 | Detail |
| CX2g023362 | 2:18,804,166-18,804,429 | - | - | - | LOC_Os02g28840 | - | - | Detail |
| CX2g020592 | 2:18,806,356-18,806,769 | - | - | C2H2g07822 | LOC_Os02g33120 | Os02g0255100 | - | Detail |
| CX2g020799 | 2:18,811,566-18,816,447 | - | C1H2g13354 | C2H2g23170 | LOC_Os02g33140 | Os02g0534800 | - | Detail |
| CX2g021888 | 2:18,820,558-18,822,503 | - | C1H2g12121 | C2H2g29478 | LOC_Os02g33149 | Os02g0535000 | - | Detail |
| CX2g024001 | 2:18,825,467-18,827,545 | - | C1H2g20410 | C2H2g19215 | LOC_Os02g26460 | Os02g0301400 | - | Detail |
| CX2g024855 | 2:18,830,231-18,830,929 | + | C1H2g12735 | C2H2g20935 | LOC_Os02g33170 | Os02g0535300 | - | Detail |
| CX2g022226 | 2:18,831,764-18,832,042 | + | - | - | - | - | - | Detail |
| CX2g023090 | 2:18,835,396-18,837,757 | - | C1H2g07156 | C2H2g16925 | LOC_Os02g33180 | Os02g0535400 | RAR1, Os RAR1 | Detail |
| CX2g021376 | 2:18,840,567-18,845,167 | + | C1H2g04282 | C2H2g30130 | LOC_Os02g33230 | Os02g0535700 | - | Detail |
| CX2g023761 | 2:18,848,729-18,849,697 | - | - | - | LOC_Os02g33240 | Os02g0535901 | - | Detail |