| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10836 | 1:28,198,216-28,199,650 | - | C2H1g29811 | CX1g002430 | LOC_Os01g54960 | Os01g0753200 | - | Detail |
| C1H1g16292 | 1:28,200,764-28,202,409 | + | C2H1g20006 | CX1g006340 | LOC_Os01g54969 | Os01g0753300 | OsASMT1 | Detail |
| C1H1g07442 | 1:28,202,676-28,208,745 | - | C2H1g09497 | CX1g002732 | LOC_Os01g54990 | Os01g0753500 | OsARF3lb | Detail |
| C1H1g02806 | 1:28,221,205-28,222,136 | + | C2H1g17359 | CX1g006658 | LOC_Os01g55020 | Os01g0754000 | - | Detail |
| C1H1g16947 | 1:28,224,309-28,226,105 | - | C2H1g07609 | CX1g002933 | LOC_Os01g55030 | Os01g0754100 | - | Detail |
| C1H1g05578 | 1:28,227,601-28,236,955 | - | C2H1g07292 | CX1g005591 | LOC_Os01g55040 | Os01g0754200 | - | Detail |
| C1H1g11544 | 1:28,237,266-28,242,179 | - | C2H1g26542 | CX1g006946 | LOC_Os01g55050 | Os01g0754500 | - | Detail |
| C1H1g27304 | 1:28,273,856-28,282,338 | - | C2H1g25651 | CX1g006404 | LOC_Os01g55094 | Os01g0755100 | - | Detail |
| C1H1g29987 | 1:28,291,077-28,292,504 | + | C2H1g07282 | CX1g000336 | LOC_Os01g55100 | Os01g0755500 | OsPCF7, PCF7 | Detail |
| C1H1g10544 | 1:28,333,028-28,335,537 | - | C2H1g26286 | CX1g005575 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| C1H1g11346 | 1:28,340,031-28,341,059 | - | C2H1g10412 | - | LOC_Os01g55140 | Os01g0756101 | - | Detail |
| C1H1g21888 | 1:28,343,215-28,343,646 | + | C2H1g27103 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| C1H1g31515 | 1:28,344,380-28,345,306 | + | C2H1g14895 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| C1H1g02918 | 1:28,352,747-28,363,013 | - | C2H1g30168 | CX1g003911 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| C1H1g08295 | 1:28,368,293-28,372,229 | + | C2H1g05126 | CX1g003221 | LOC_Os01g55190 | Os01g0531400 | - | Detail |
| C1H1g21813 | 1:28,381,812-28,384,050 | + | C2H1g22597 | CX1g002081 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| C1H1g15032 | 1:28,402,160-28,404,225 | + | C2H1g23299 | CX1g004140 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| C1H1g13228 | 1:28,418,667-28,422,542 | + | C2H1g18562 | CX1g001542 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| C1H1g20677 | 1:28,423,057-28,425,847 | - | C2H1g15915 | CX1g000631 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| C1H1g01435 | 1:28,432,212-28,434,104 | - | C2H1g24400 | CX1g004257 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019759 | 2:18,721,215-18,721,802 | + | C1H4g02994 | C2H4g01788 | LOC_Os02g32990 | Os02g0532800 | OsBIC2 | Detail |
| CX2g023689 | 2:18,725,938-18,728,926 | + | C1H2g22832 | C2H2g22707 | LOC_Os02g33000 | Os02g0532900 | - | Detail |
| CX2g019017 | 2:18,730,496-18,735,355 | - | C1H2g16813 | C2H2g18655 | LOC_Os02g33010 | Os02g0533000 | - | Detail |
| CX2g024724 | 2:18,739,076-18,741,511 | + | C1H2g00080 | C2H2g19682 | LOC_Os02g33020 | Os02g0533200 | - | Detail |
| CX2g023010 | 2:18,742,788-18,745,133 | + | C1H2g31211 | C2H2g19682 | LOC_Os02g33030 | Os02g0533300 | OsalphaCA1, OsαCA1 | Detail |
| CX2g021594 | 2:18,750,362-18,751,018 | + | - | C2H4g20884 | LOC_Os02g33060 | Os02g0533700 | - | Detail |
| CX2g021223 | 2:18,753,299-18,754,041 | - | - | - | - | - | - | Detail |
| CX2g021454 | 2:18,754,576-18,757,527 | + | C1H2g23938 | C2H2g19843 | LOC_Os02g33080 | Os02g0533900 | - | Detail |
| CX2g020347 | 2:18,758,441-18,759,016 | - | - | - | LOC_Os02g33090 | Os02g0534000 | - | Detail |
| CX2g022901 | 2:18,787,059-18,791,520 | + | C1H2g03846 | C2H2g12855 | LOC_Os02g33110 | Os02g0534400 | OsCIN1 | Detail |
| CX2g023362 | 2:18,804,166-18,804,429 | - | - | - | LOC_Os02g28840 | - | - | Detail |
| CX2g020592 | 2:18,806,356-18,806,769 | - | - | C2H2g07822 | LOC_Os02g33120 | Os02g0255100 | - | Detail |
| CX2g020799 | 2:18,811,566-18,816,447 | - | C1H2g13354 | C2H2g23170 | LOC_Os02g33140 | Os02g0534800 | - | Detail |
| CX2g021888 | 2:18,820,558-18,822,503 | - | C1H2g12121 | C2H2g29478 | LOC_Os02g33149 | Os02g0535000 | - | Detail |
| CX2g024001 | 2:18,825,467-18,827,545 | - | C1H2g20410 | C2H2g19215 | LOC_Os02g26460 | Os02g0301400 | - | Detail |
| CX2g024855 | 2:18,830,231-18,830,929 | + | C1H2g12735 | C2H2g20935 | LOC_Os02g33170 | Os02g0535300 | - | Detail |
| CX2g022226 | 2:18,831,764-18,832,042 | + | - | - | - | - | - | Detail |
| CX2g023090 | 2:18,835,396-18,837,757 | - | C1H2g07156 | C2H2g16925 | LOC_Os02g33180 | Os02g0535400 | RAR1, Os RAR1 | Detail |
| CX2g021376 | 2:18,840,567-18,845,167 | + | C1H2g04282 | C2H2g30130 | LOC_Os02g33230 | Os02g0535700 | - | Detail |
| CX2g023761 | 2:18,848,729-18,849,697 | - | - | - | LOC_Os02g33240 | Os02g0535901 | - | Detail |