| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27512 | 1:33,363,747-33,368,876 | + | C2H1g12820 | CX1g001484 | LOC_Os01g64970 | Os01g0869900 | SAPK4, OsSAPK4 | Detail |
| C1H1g13667 | 1:33,369,268-33,374,670 | - | C2H1g15095 | CX1g002784 | LOC_Os01g64980 | Os01g0870100 | - | Detail |
| C1H1g03643 | 1:33,377,648-33,382,173 | + | C2H1g13430 | CX1g005766 | LOC_Os01g64990 | Os01g0870201 | - | Detail |
| C1H1g25940 | 1:33,383,127-33,389,151 | + | C2H1g08641 | CX1g004934 | LOC_Os01g64990 | Os01g0870300 | OsAMT3;1 | Detail |
| C1H1g13069 | 1:33,391,410-33,392,506 | + | C2H1g07832 | CX1g001460 | LOC_Os01g65000 | Os01g0831900 | - | Detail |
| C1H1g14637 | 1:33,393,995-33,394,504 | + | C2H1g07832 | CX1g001460 | LOC_Os01g65000 | Os01g0831900 | - | Detail |
| C1H1g23698 | 1:33,395,491-33,401,972 | - | C2H1g11379 | CX1g006514 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C1H1g07139 | 1:33,402,061-33,403,231 | - | C2H1g20125 | CX1g006514 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C1H1g23372 | 1:33,411,620-33,412,095 | - | C2H1g20125 | CX1g001391 | LOC_Os01g65030 | Os01g0642700 | SDRLP-4 | Detail |
| C1H1g27684 | 1:33,414,470-33,415,492 | - | C2H1g08106 | CX1g001391 | LOC_Os01g65010 | Os01g0870500 | - | Detail |
| C1H1g27436 | 1:33,415,833-33,417,181 | - | C2H1g20125 | CX1g001391 | LOC_Os01g65030 | Os01g0870400 | SDRLK-16 | Detail |
| C1H1g16493 | 1:33,428,222-33,430,348 | + | C2H1g11379 | CX1g004252 | LOC_Os01g65060 | Os01g0871000 | SDRLK-70 | Detail |
| C1H1g29415 | 1:33,431,783-33,438,633 | + | C2H1g28915 | CX1g002432 | LOC_Os01g65070 | Os01g0871100 | - | Detail |
| C1H1g03641 | 1:33,446,117-33,451,138 | + | C2H1g00963 | CX1g005777 | LOC_Os01g65090 | Os01g0871300 | - | Detail |
| C1H1g20493 | 1:33,451,777-33,453,684 | - | C2H1g24816 | CX1g000514 | LOC_Os01g65094 | Os01g0871350 | - | Detail |
| C1H1g22072 | 1:33,457,712-33,460,587 | + | C2H1g04874 | CX1g000896 | LOC_Os01g65110 | Os01g0871500 | - | Detail |
| C1H1g21395 | 1:33,463,180-33,465,082 | + | C2H1g16882 | CX1g000896 | LOC_Os01g65110 | Os01g0871600 | POT | Detail |
| C1H1g10480 | 1:33,473,643-33,474,157 | + | C2H1g16169 | CX1g000896 | LOC_Os01g65120 | Os01g0871700 | SBM1 | Detail |
| C1H1g15082 | 1:33,474,266-33,475,563 | + | C2H1g03879 | CX1g000896 | LOC_Os01g65120 | Os01g0872400 | - | Detail |
| C1H1g26845 | 1:33,478,845-33,479,276 | + | C2H1g24640 | CX1g000896 | LOC_Os01g65130 | Os01g0871800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024033 | 2:18,430,229-18,431,413 | + | - | - | LOC_Os02g32540 | Os02g0526600 | - | Detail |
| CX2g022577 | 2:18,443,063-18,444,325 | - | C1H4g08512 | - | LOC_Os02g32550 | Os02g0526700 | - | Detail |
| CX2g023594 | 2:18,445,444-18,446,073 | - | - | - | - | - | - | Detail |
| CX2g021068 | 2:18,454,278-18,463,254 | + | C1H2g04564 | C2H2g16566 | LOC_Os02g32570 | Os02g0527100 | OsCHR710, CHR710 | Detail |
| CX2g019839 | 2:18,464,347-18,465,061 | - | C1H2g29093 | C2H2g17442 | LOC_Os02g32580 | Os02g0527200 | - | Detail |
| CX2g022921 | 2:18,470,372-18,473,165 | - | C1H2g07585 | C2H2g30266 | LOC_Os02g32590 | Os02g0527300 | - | Detail |
| CX2g018857 | 2:18,475,713-18,476,177 | + | - | - | - | Os11g0639400 | - | Detail |
| CX2g023779 | 2:18,478,492-18,478,722 | + | - | - | - | - | - | Detail |
| CX2g019756 | 2:18,484,508-18,484,702 | - | - | - | - | - | - | Detail |
| CX2g019234 | 2:18,493,080-18,499,314 | - | C1H2g23562 | C2H2g23334 | LOC_Os02g30900 | Os02g0527600 | OsCTR2 | Detail |
| CX2g023606 | 2:18,502,330-18,502,605 | + | - | - | - | Os02g0527700 | - | Detail |
| CX2g020450 | 2:18,509,171-18,509,566 | - | - | - | - | Os02g0527800 | - | Detail |
| CX2g019035 | 2:18,514,949-18,516,382 | + | C1H2g31681 | C2H2g22142 | LOC_Os02g32620 | Os02g0527900 | - | Detail |
| CX2g019446 | 2:18,519,251-18,519,436 | - | - | - | - | Os02g0527950 | - | Detail |
| CX2g023161 | 2:18,519,996-18,524,979 | - | C1H2g27676 | C2H2g01475 | LOC_Os02g33720 | Os02g0528000 | - | Detail |
| CX2g019088 | 2:18,528,041-18,528,760 | - | C1H2g02493 | C2H2g30277 | LOC_Os02g32650 | Os02g0528100 | - | Detail |
| CX2g022806 | 2:18,530,642-18,541,921 | - | C1H2g15691 | C2H2g20323 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| CX2g020306 | 2:18,558,963-18,568,385 | - | C1H2g14806 | C2H2g15285 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| CX2g023111 | 2:18,570,768-18,571,115 | + | - | - | - | - | - | Detail |
| CX2g022433 | 2:18,584,278-18,588,120 | + | C1H2g00920 | C2H2g10414 | LOC_Os02g32730 | Os02g0529400 | - | Detail |