| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g03565 | 3:27,757,241-27,762,050 | - | C2H3g30083 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| C1H3g02226 | 3:27,770,845-27,773,599 | + | C2H3g21290 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C1H3g17376 | 3:27,774,201-27,779,758 | - | C2H3g14903 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C1H3g20845 | 3:27,796,136-27,796,740 | - | C2H3g08813 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C1H3g06495 | 3:27,798,225-27,803,096 | - | C2H3g26898 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C1H3g20532 | 3:27,805,979-27,808,428 | - | C2H3g29132 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C1H3g31203 | 3:27,809,897-27,819,332 | - | C2H3g04769 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C1H3g28999 | 3:27,834,496-27,836,232 | + | C2H3g17627 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C1H3g18589 | 3:27,836,841-27,839,340 | - | C2H3g26829 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C1H3g28804 | 3:27,842,113-27,842,849 | - | C2H3g16078 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g29743 | 3:27,843,063-27,843,350 | - | C2H3g10133 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g10075 | 3:27,866,273-27,868,561 | - | C2H3g07488 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C1H3g08935 | 3:27,895,355-27,902,228 | - | C2H3g29705 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C1H3g03486 | 3:27,906,842-27,909,468 | + | C2H3g15707 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C1H3g05198 | 3:27,919,671-27,921,516 | - | C2H3g03478 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C1H3g06505 | 3:27,927,520-27,927,825 | - | C2H3g14472 | - | LOC_Os03g51890 | - | - | Detail |
| C1H3g18395 | 3:27,931,998-27,939,296 | - | C2H3g03813 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C1H3g26338 | 3:27,941,344-27,943,020 | - | C2H3g06913 | CX3g030922 | LOC_Os03g56630 | Os03g0181600 | - | Detail |
| C1H3g00993 | 3:27,946,183-27,954,698 | + | C2H3g12518 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C1H3g31891 | 3:27,955,692-27,959,509 | - | C2H3g09824 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004585 | 1:10,274,233-10,274,763 | - | - | - | LOC_Os01g20730 | Os01g0308600 | - | Detail |
| CX1g002111 | 1:10,297,121-10,297,672 | + | - | - | LOC_Os01g20780 | Os01g0309100 | - | Detail |
| CX1g003088 | 1:10,299,210-10,299,893 | + | - | - | - | - | - | Detail |
| CX1g001078 | 1:10,322,606-10,323,713 | + | C1H1g09566 | C2H1g12164 | LOC_Os01g20830 | Os01g0309800 | - | Detail |
| CX1g001846 | 1:10,331,341-10,335,086 | + | C1H1g13090 | C2H1g06659 | LOC_Os01g20840 | Os01g0309900 | - | Detail |
| CX1g001918 | 1:10,336,963-10,347,002 | - | C1H1g24589 | C2H1g26562 | LOC_Os01g20860 | Os01g0310100 | - | Detail |
| CX1g005098 | 1:10,353,346-10,353,699 | + | - | - | - | - | - | Detail |
| CX1g005110 | 1:10,379,243-10,381,442 | + | C1H1g24151 | C2H1g11171 | LOC_Os01g20880 | Os01g0310500 | - | Detail |
| CX1g002504 | 1:10,381,852-10,384,250 | + | C1H1g24151 | C2H1g17166 | LOC_Os01g20880 | Os01g0310800 | - | Detail |
| CX1g002266 | 1:10,392,124-10,394,889 | + | C1H1g20174 | C2H1g21565 | LOC_Os01g20910 | Os01g0311100 | - | Detail |
| CX1g005596 | 1:10,397,731-10,403,326 | + | C1H1g03706 | C2H1g04294 | LOC_Os01g20940 | Os01g0311500 | - | Detail |
| CX1g000260 | 1:10,405,296-10,406,348 | - | C1H1g28214 | - | LOC_Os01g20950 | Os01g0311600 | - | Detail |
| CX1g000747 | 1:10,408,137-10,408,853 | + | C1H1g01250 | C2H1g02829 | LOC_Os01g20970 | Os01g0311700 | OsPMEI3 | Detail |
| CX1g006521 | 1:10,410,142-10,412,247 | - | C1H1g26546 | C2H1g13458 | LOC_Os01g20980 | Os01g0311800 | - | Detail |
| CX1g001580 | 1:10,423,226-10,423,519 | + | - | - | - | - | - | Detail |
| CX1g005083 | 1:10,428,719-10,437,833 | + | C1H1g11820 | C2H1g09479 | LOC_Os01g21034 | Os01g0312500 | PME42 | Detail |
| CX1g001330 | 1:10,454,267-10,456,441 | + | C1H1g17184 | C2H1g04512 | LOC_Os01g21070 | Os01g0312800 | - | Detail |
| CX1g006367 | 1:10,474,275-10,474,989 | + | C1H1g08378 | C2H1g03011 | LOC_Os01g21120 | Os01g0313300 | - | Detail |
| CX1g004973 | 1:10,484,280-10,487,051 | - | C1H1g22116 | C2H1g01551 | LOC_Os01g21144 | Os01g0314000 | - | Detail |
| CX1g005719 | 1:10,488,252-10,492,670 | - | C1H1g26432 | C2H1g09093 | LOC_Os01g21160 | Os01g0314100 | - | Detail |