| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10702 | 6:2,358,334-2,363,633 | + | C2H6g22760 | CX6g041514 | LOC_Os06g06280 | Os06g0156900 | - | Detail |
| C1H6g08331 | 6:2,364,398-2,367,299 | - | C2H6g18770 | CX6g041481 | LOC_Os06g06290 | Os06g0157000 | - | Detail |
| C1H6g29479 | 6:2,382,620-2,383,929 | + | C2H6g09001 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C1H6g06407 | 6:2,394,218-2,394,830 | + | C2H6g08710 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g09433 | 6:2,396,169-2,396,592 | + | C2H6g23992 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C1H6g29691 | 6:2,400,745-2,401,110 | + | C2H6g09872 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C1H6g17983 | 6:2,401,145-2,401,854 | - | - | - | - | - | - | Detail |
| C1H6g13605 | 6:2,403,300-2,403,780 | + | C2H6g19375 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C1H6g01052 | 6:2,405,333-2,413,066 | + | C2H6g03223 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C1H6g08202 | 6:2,415,170-2,418,470 | + | C2H6g20805 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C1H6g28677 | 6:2,420,830-2,427,627 | + | C2H6g18246 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C1H6g07185 | 6:2,428,154-2,433,934 | - | C2H6g22243 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C1H6g00361 | 6:2,437,468-2,440,022 | - | C2H6g03461 | CX6g045279 | LOC_Os06g06380 | Os06g0158400 | - | Detail |
| C1H6g04562 | 6:2,441,500-2,445,061 | - | C2H6g12842 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C1H6g29953 | 6:2,448,280-2,450,849 | - | C2H6g18686 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C1H6g03313 | 6:2,451,132-2,453,154 | + | C2H6g03596 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C1H6g02873 | 6:2,456,168-2,466,853 | - | C2H6g14590 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C1H6g15545 | 6:2,490,044-2,493,647 | + | C2H6g19286 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C1H6g14833 | 6:2,496,564-2,500,564 | + | C2H6g03704 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C1H6g29654 | 6:2,509,973-2,513,890 | + | C2H6g13339 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004585 | 1:10,274,233-10,274,763 | - | - | - | LOC_Os01g20730 | Os01g0308600 | - | Detail |
| CX1g002111 | 1:10,297,121-10,297,672 | + | - | - | LOC_Os01g20780 | Os01g0309100 | - | Detail |
| CX1g003088 | 1:10,299,210-10,299,893 | + | - | - | - | - | - | Detail |
| CX1g001078 | 1:10,322,606-10,323,713 | + | C1H1g09566 | C2H1g12164 | LOC_Os01g20830 | Os01g0309800 | - | Detail |
| CX1g001846 | 1:10,331,341-10,335,086 | + | C1H1g13090 | C2H1g06659 | LOC_Os01g20840 | Os01g0309900 | - | Detail |
| CX1g001918 | 1:10,336,963-10,347,002 | - | C1H1g24589 | C2H1g26562 | LOC_Os01g20860 | Os01g0310100 | - | Detail |
| CX1g005098 | 1:10,353,346-10,353,699 | + | - | - | - | - | - | Detail |
| CX1g005110 | 1:10,379,243-10,381,442 | + | C1H1g24151 | C2H1g11171 | LOC_Os01g20880 | Os01g0310500 | - | Detail |
| CX1g002504 | 1:10,381,852-10,384,250 | + | C1H1g24151 | C2H1g17166 | LOC_Os01g20880 | Os01g0310800 | - | Detail |
| CX1g002266 | 1:10,392,124-10,394,889 | + | C1H1g20174 | C2H1g21565 | LOC_Os01g20910 | Os01g0311100 | - | Detail |
| CX1g005596 | 1:10,397,731-10,403,326 | + | C1H1g03706 | C2H1g04294 | LOC_Os01g20940 | Os01g0311500 | - | Detail |
| CX1g000260 | 1:10,405,296-10,406,348 | - | C1H1g28214 | - | LOC_Os01g20950 | Os01g0311600 | - | Detail |
| CX1g000747 | 1:10,408,137-10,408,853 | + | C1H1g01250 | C2H1g02829 | LOC_Os01g20970 | Os01g0311700 | OsPMEI3 | Detail |
| CX1g006521 | 1:10,410,142-10,412,247 | - | C1H1g26546 | C2H1g13458 | LOC_Os01g20980 | Os01g0311800 | - | Detail |
| CX1g001580 | 1:10,423,226-10,423,519 | + | - | - | - | - | - | Detail |
| CX1g005083 | 1:10,428,719-10,437,833 | + | C1H1g11820 | C2H1g09479 | LOC_Os01g21034 | Os01g0312500 | PME42 | Detail |
| CX1g001330 | 1:10,454,267-10,456,441 | + | C1H1g17184 | C2H1g04512 | LOC_Os01g21070 | Os01g0312800 | - | Detail |
| CX1g006367 | 1:10,474,275-10,474,989 | + | C1H1g08378 | C2H1g03011 | LOC_Os01g21120 | Os01g0313300 | - | Detail |
| CX1g004973 | 1:10,484,280-10,487,051 | - | C1H1g22116 | C2H1g01551 | LOC_Os01g21144 | Os01g0314000 | - | Detail |
| CX1g005719 | 1:10,488,252-10,492,670 | - | C1H1g26432 | C2H1g09093 | LOC_Os01g21160 | Os01g0314100 | - | Detail |