| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g07169 | 3:24,930,452-24,931,840 | + | C1H3g01296 | CX3g029210 | LOC_Os03g47860 | Os03g0682900 | OsACT | Detail |
| C2H3g13971 | 3:24,930,577-24,934,598 | - | - | CX3g025680 | - | Os03g0682822 | - | Detail |
| C2H3g28221 | 3:24,938,787-24,939,560 | - | C1H3g26805 | CX3g030162 | LOC_Os03g47890 | Os03g0683200 | - | Detail |
| C2H3g09855 | 3:24,943,523-24,944,401 | - | C1H3g30362 | CX3g027958 | LOC_Os03g47896 | Os03g0683300 | - | Detail |
| C2H3g01457 | 3:24,947,155-24,965,254 | - | C1H3g01955 | - | LOC_Os03g47920 | Os03g0683816 | - | Detail |
| C2H3g15375 | 3:24,948,114-24,960,575 | + | C1H3g30757 | CX3g026415 | LOC_Os03g47930 | Os03g0138600 | - | Detail |
| C2H3g26490 | 3:24,961,781-24,966,092 | + | C1H3g31733 | CX3g030593 | LOC_Os03g47940 | Os03g0683800 | - | Detail |
| C2H3g09499 | 3:24,967,921-24,985,421 | - | C1H3g20424 | CX3g028427 | LOC_Os03g47949 | Os03g0683900 | - | Detail |
| C2H3g10030 | 3:24,987,577-24,993,187 | - | C1H3g09827 | CX3g029806 | LOC_Os03g47980 | Os03g0684100 | - | Detail |
| C2H3g27014 | 3:24,994,119-24,996,866 | + | C1H3g13222 | CX3g027899 | LOC_Os03g47990 | Os03g0684300 | - | Detail |
| C2H3g26230 | 3:24,999,027-25,005,037 | + | C1H3g18256 | CX3g029805 | LOC_Os03g48000 | Os03g0684400 | OsMGT3 | Detail |
| C2H3g13044 | 3:25,007,615-25,010,224 | + | C1H3g27366 | CX3g027834 | LOC_Os03g48010 | Os03g0684500 | - | Detail |
| C2H3g22552 | 3:25,010,928-25,012,812 | - | C1H3g15233 | CX3g025275 | LOC_Os03g48030 | Os03g0684700 | - | Detail |
| C2H3g24042 | 3:25,016,778-25,019,511 | + | C1H3g05365 | CX3g030044 | LOC_Os03g48040 | Os03g0685000 | OsFdC2, OsHDY1 | Detail |
| C2H3g04933 | 3:25,021,450-25,023,953 | + | C1H3g13814 | CX3g026303 | LOC_Os03g48050 | Os03g0685100 | - | Detail |
| C2H3g28672 | 3:25,039,817-25,040,380 | + | - | - | - | - | - | Detail |
| C2H3g27897 | 3:25,042,457-25,045,714 | + | C1H3g01967 | CX3g027858 | LOC_Os03g48060 | Os03g0685300 | FLO19 | Detail |
| C2H3g26335 | 3:25,051,524-25,055,249 | - | C1H3g16679 | CX3g028901 | LOC_Os03g48080 | Os03g0685500 | - | Detail |
| C2H3g24853 | 3:25,055,827-25,059,882 | - | C1H3g01229 | CX3g029151 | LOC_Os03g48090 | Os03g0685600 | - | Detail |
| C2H3g18835 | 3:25,059,905-25,060,524 | - | C1H3g02003 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020476 | 2:17,223,855-17,228,716 | + | C1H2g01468 | C2H2g20012 | LOC_Os02g27500 | Os02g0286850 | - | Detail |
| CX2g019672 | 2:17,239,007-17,239,300 | + | - | - | - | - | - | Detail |
| CX2g023930 | 2:17,241,167-17,245,837 | + | C1H2g00204 | C2H2g15783 | LOC_Os02g30080 | Os02g0503700 | - | Detail |
| CX2g018948 | 2:17,259,621-17,261,719 | + | C1H2g03147 | C2H2g13877 | LOC_Os02g30100 | Os02g0503900 | - | Detail |
| CX2g021132 | 2:17,266,936-17,268,999 | + | C1H2g19248 | C2H2g02959 | LOC_Os02g30110 | Os02g0503900 | - | Detail |
| CX2g022607 | 2:17,273,880-17,277,454 | + | C1H2g17286 | C2H2g00489 | LOC_Os02g30140 | Os02g0504100 | - | Detail |
| CX2g020329 | 2:17,279,630-17,281,375 | + | C1H2g17091 | C2H2g23947 | LOC_Os02g30150 | Os02g0504200 | - | Detail |
| CX2g020016 | 2:17,289,692-17,294,725 | + | C1H2g04923 | C2H2g01790 | LOC_Os02g30180 | Os02g0504500 | - | Detail |
| CX2g020046 | 2:17,295,388-17,295,699 | + | - | - | - | - | - | Detail |
| CX2g023994 | 2:17,306,665-17,307,548 | + | C1H2g08439 | C2H2g26618 | LOC_Os02g30190 | Os02g0504700 | - | Detail |
| CX2g023521 | 2:17,308,903-17,314,271 | - | C1H2g16174 | C2H2g18925 | LOC_Os02g30200 | Os02g0504800 | - | Detail |
| CX2g022225 | 2:17,315,711-17,317,099 | - | C1H2g10661 | C2H2g05236 | LOC_Os02g30210 | Os02g0504900 | - | Detail |
| CX2g021271 | 2:17,330,893-17,332,827 | + | C1H2g27409 | C2H2g14296 | LOC_Os02g30230 | Os02g0505400 | EXO70F2, OsEXO70F2, OsExo70F2, OrysaF2_Exo70, OsExo70-F2, Exo70-F2 | Detail |
| CX2g022932 | 2:17,337,242-17,337,907 | - | - | - | LOC_Os02g30240 | Os02g0505500 | - | Detail |
| CX2g022529 | 2:17,339,623-17,339,790 | + | - | - | - | - | - | Detail |
| CX2g022647 | 2:17,347,410-17,347,670 | - | - | - | - | Os02g0505700 | - | Detail |
| CX2g020887 | 2:17,354,690-17,359,949 | + | C1H2g02109 | C2H2g08041 | LOC_Os02g30280 | Os02g0506100 | - | Detail |
| CX2g021371 | 2:17,361,276-17,361,449 | - | - | - | - | - | - | Detail |
| CX2g024723 | 2:17,363,676-17,363,870 | - | C1H2g13436 | C2H2g03240 | - | - | - | Detail |
| CX2g023775 | 2:17,379,727-17,381,159 | - | C1H2g03278 | C2H2g30301 | LOC_Os02g30300 | Os02g0506400 | - | Detail |