| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03290 | 3:12,842,350-12,842,710 | - | - | - | - | - | - | Detail |
| C2H3g10191 | 3:12,850,682-12,854,416 | + | C1H3g05126 | CX3g029883 | LOC_Os03g25400 | Os03g0370000 | - | Detail |
| C2H3g30681 | 3:12,856,860-12,861,072 | + | C1H7g09543 | CX3g025282 | LOC_Os03g25420 | Os03g0370200 | - | Detail |
| C2H3g01146 | 3:12,873,841-12,875,804 | - | C1H3g27086 | CX3g026690 | LOC_Os03g25460 | Os03g0370600 | - | Detail |
| C2H3g30283 | 3:12,879,327-12,879,884 | + | - | - | LOC_Os03g25470 | Os03g0370800 | - | Detail |
| C2H3g00547 | 3:12,880,237-12,883,385 | + | C1H3g23354 | CX3g031102 | LOC_Os03g25480 | Os03g0370900 | - | Detail |
| C2H3g19651 | 3:12,886,574-12,888,839 | + | C1H3g05051 | CX3g027113 | LOC_Os03g25490 | Os03g0371000 | - | Detail |
| C2H3g04381 | 3:12,895,170-12,900,255 | + | C1H3g00840 | CX3g027113 | LOC_Os03g25500 | Os03g0371300 | - | Detail |
| C2H3g15015 | 3:12,900,679-12,901,104 | + | C1H3g21806 | CX3g031102 | LOC_Os03g25490 | Os03g0370900 | - | Detail |
| C2H3g00617 | 3:12,916,267-12,917,663 | - | C1H3g16595 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C2H3g13066 | 3:12,950,028-12,958,451 | + | C1H3g09237 | CX3g030141 | LOC_Os03g25600 | Os03g0821300 | - | Detail |
| C2H3g24461 | 3:12,960,944-12,961,547 | - | C1H3g20988 | CX3g030815 | LOC_Os03g25610 | Os03g0372600 | - | Detail |
| C2H3g09558 | 3:12,963,888-12,967,217 | + | C1H3g26671 | CX3g025086 | LOC_Os03g25620 | Os03g0372700 | - | Detail |
| C2H3g30423 | 3:12,991,252-12,995,111 | - | C1H3g02459 | CX3g029031 | LOC_Os03g25720 | Os03g0374100 | - | Detail |
| C2H3g09363 | 3:12,999,642-13,003,631 | + | C1H3g03430 | CX3g025872 | LOC_Os03g25750 | Os03g0374400 | - | Detail |
| C2H3g02420 | 3:13,004,759-13,007,289 | - | C1H3g29992 | CX3g031135 | LOC_Os03g25760 | Os03g0374500 | OsIQM3 | Detail |
| C2H3g06785 | 3:13,017,921-13,019,872 | - | C1H3g04281 | CX3g028239 | LOC_Os03g25770 | Os03g0374575 | OsSCL26 | Detail |
| C2H3g13807 | 3:13,024,500-13,029,718 | + | C1H3g12991 | CX3g025908 | LOC_Os03g25790 | Os03g0374600 | - | Detail |
| C2H3g07823 | 3:13,036,024-13,036,503 | - | C1H3g11329 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C2H3g01665 | 3:13,043,224-13,043,499 | + | - | - | LOC_Os03g25830 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020476 | 2:17,223,855-17,228,716 | + | C1H2g01468 | C2H2g20012 | LOC_Os02g27500 | Os02g0286850 | - | Detail |
| CX2g019672 | 2:17,239,007-17,239,300 | + | - | - | - | - | - | Detail |
| CX2g023930 | 2:17,241,167-17,245,837 | + | C1H2g00204 | C2H2g15783 | LOC_Os02g30080 | Os02g0503700 | - | Detail |
| CX2g018948 | 2:17,259,621-17,261,719 | + | C1H2g03147 | C2H2g13877 | LOC_Os02g30100 | Os02g0503900 | - | Detail |
| CX2g021132 | 2:17,266,936-17,268,999 | + | C1H2g19248 | C2H2g02959 | LOC_Os02g30110 | Os02g0503900 | - | Detail |
| CX2g022607 | 2:17,273,880-17,277,454 | + | C1H2g17286 | C2H2g00489 | LOC_Os02g30140 | Os02g0504100 | - | Detail |
| CX2g020329 | 2:17,279,630-17,281,375 | + | C1H2g17091 | C2H2g23947 | LOC_Os02g30150 | Os02g0504200 | - | Detail |
| CX2g020016 | 2:17,289,692-17,294,725 | + | C1H2g04923 | C2H2g01790 | LOC_Os02g30180 | Os02g0504500 | - | Detail |
| CX2g020046 | 2:17,295,388-17,295,699 | + | - | - | - | - | - | Detail |
| CX2g023994 | 2:17,306,665-17,307,548 | + | C1H2g08439 | C2H2g26618 | LOC_Os02g30190 | Os02g0504700 | - | Detail |
| CX2g023521 | 2:17,308,903-17,314,271 | - | C1H2g16174 | C2H2g18925 | LOC_Os02g30200 | Os02g0504800 | - | Detail |
| CX2g022225 | 2:17,315,711-17,317,099 | - | C1H2g10661 | C2H2g05236 | LOC_Os02g30210 | Os02g0504900 | - | Detail |
| CX2g021271 | 2:17,330,893-17,332,827 | + | C1H2g27409 | C2H2g14296 | LOC_Os02g30230 | Os02g0505400 | EXO70F2, OsEXO70F2, OsExo70F2, OrysaF2_Exo70, OsExo70-F2, Exo70-F2 | Detail |
| CX2g022932 | 2:17,337,242-17,337,907 | - | - | - | LOC_Os02g30240 | Os02g0505500 | - | Detail |
| CX2g022529 | 2:17,339,623-17,339,790 | + | - | - | - | - | - | Detail |
| CX2g022647 | 2:17,347,410-17,347,670 | - | - | - | - | Os02g0505700 | - | Detail |
| CX2g020887 | 2:17,354,690-17,359,949 | + | C1H2g02109 | C2H2g08041 | LOC_Os02g30280 | Os02g0506100 | - | Detail |
| CX2g021371 | 2:17,361,276-17,361,449 | - | - | - | - | - | - | Detail |
| CX2g024723 | 2:17,363,676-17,363,870 | - | C1H2g13436 | C2H2g03240 | - | - | - | Detail |
| CX2g023775 | 2:17,379,727-17,381,159 | - | C1H2g03278 | C2H2g30301 | LOC_Os02g30300 | Os02g0506400 | - | Detail |