| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13230 | 3:2,418,388-2,421,481 | - | C2H3g27191 | CX3g027575 | LOC_Os03g05520 | Os03g0149200 | - | Detail |
| C1H3g28897 | 3:2,427,257-2,429,725 | - | C2H3g02809 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C1H3g27908 | 3:2,435,003-2,437,715 | + | C2H3g29786 | CX3g029578 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| C1H3g00677 | 3:2,440,791-2,441,338 | + | C2H3g29884 | - | - | - | - | Detail |
| C1H3g00185 | 3:2,446,118-2,447,044 | - | C2H3g01040 | CX3g030199 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| C1H3g00155 | 3:2,453,622-2,454,521 | - | C2H3g29045 | CX3g028233 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| C1H3g19498 | 3:2,470,321-2,470,746 | + | C2H3g13096 | CX3g030128 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| C1H3g28178 | 3:2,472,952-2,474,577 | + | C2H3g29028 | CX3g030522 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| C1H3g29432 | 3:2,476,401-2,477,984 | - | C2H3g30077 | CX3g029750 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| C1H3g22703 | 3:2,480,135-2,480,416 | + | C2H3g00543 | - | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C1H3g31371 | 3:2,480,559-2,482,194 | + | C2H3g05251 | CX3g024968 | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C1H3g21603 | 3:2,490,304-2,490,628 | + | C2H3g19570 | - | - | Os03g0150700 | - | Detail |
| C1H3g04203 | 3:2,491,900-2,493,486 | - | C2H3g28429 | CX3g028575 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| C1H3g13409 | 3:2,498,020-2,503,081 | - | C2H3g24713 | CX3g030168 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| C1H3g18077 | 3:2,507,699-2,515,990 | + | C2H3g23634 | CX3g028756 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |
| C1H3g12618 | 3:2,516,387-2,516,698 | - | C2H3g25123 | CX3g027574 | LOC_Os03g05700 | Os03g0151500 | - | Detail |
| C1H3g18071 | 3:2,518,486-2,519,169 | - | C2H3g19949 | CX3g029524 | LOC_Os03g05710 | Os03g0151600 | - | Detail |
| C1H3g05811 | 3:2,520,194-2,525,967 | + | C2H3g16820 | CX3g027544 | LOC_Os03g05720 | Os03g0151700 | - | Detail |
| C1H3g17815 | 3:2,526,507-2,530,776 | - | C2H3g19649 | CX3g029565 | LOC_Os03g05730 | Os03g0151800 | - | Detail |
| C1H3g19009 | 3:2,531,441-2,533,055 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021255 | 2:17,058,106-17,058,834 | + | - | - | LOC_Os09g09410 | - | - | Detail |
| CX2g020138 | 2:17,060,751-17,061,413 | - | - | - | LOC_Os09g09410 | - | - | Detail |
| CX2g021544 | 2:17,077,816-17,080,901 | + | C1H2g25316 | C2H2g27309 | LOC_Os02g29720 | Os02g0500700 | - | Detail |
| CX2g020484 | 2:17,086,717-17,087,243 | - | C1H2g24510 | - | - | - | - | Detail |
| CX2g022375 | 2:17,090,184-17,094,489 | - | C1H2g02483 | C2H2g10739 | LOC_Os02g29600 | Os02g0550500 | - | Detail |
| CX2g019923 | 2:17,109,209-17,111,677 | + | C1H2g30335 | C2H2g27309 | LOC_Os02g29720 | Os02g0500700 | - | Detail |
| CX2g021045 | 2:17,120,726-17,124,663 | - | C1H2g02483 | C2H2g26269 | LOC_Os02g29600 | Os02g0621300 | OsCER1 | Detail |
| CX2g019497 | 2:17,138,258-17,140,130 | - | C1H2g26097 | C2H2g27309 | LOC_Os02g29720 | Os02g0500700 | - | Detail |
| CX2g022304 | 2:17,148,413-17,149,126 | - | - | - | LOC_Os04g06290 | - | - | Detail |
| CX2g024798 | 2:17,152,383-17,152,721 | - | - | - | - | Os02g0215600 | - | Detail |
| CX2g021077 | 2:17,153,054-17,153,735 | - | - | - | - | - | - | Detail |
| CX2g022534 | 2:17,154,728-17,155,111 | - | - | - | - | - | - | Detail |
| CX2g019809 | 2:17,166,137-17,168,170 | + | C1H2g27752 | C2H2g04190 | LOC_Os02g29890 | Os02g0502500 | - | Detail |
| CX2g022415 | 2:17,175,303-17,177,838 | + | C1H2g04058 | C2H2g08548 | LOC_Os02g29960 | Os02g0503100 | - | Detail |
| CX2g019751 | 2:17,183,608-17,184,264 | - | - | - | LOC_Os08g26210 | - | - | Detail |
| CX2g023097 | 2:17,187,025-17,192,236 | + | C1H2g17175 | C2H2g19523 | LOC_Os02g29980 | Os02g0503350 | - | Detail |
| CX2g020795 | 2:17,192,755-17,192,904 | - | - | - | - | - | - | Detail |
| CX2g019002 | 2:17,193,633-17,194,979 | + | C1H2g03858 | C2H2g29579 | LOC_Os02g30050 | Os02g0503400 | - | Detail |
| CX2g022682 | 2:17,195,735-17,200,779 | - | C1H2g13531 | C2H2g17083 | LOC_Os02g30060 | Os02g0503500 | - | Detail |
| CX2g019561 | 2:17,217,392-17,217,661 | - | - | - | - | - | - | Detail |